[HTML][HTML] Dynamical coarse-grained models of molecular liquids and their ideal and non-ideal mixtures
M Tripathy, V Klippenstein… - The Journal of Chemical …, 2023 - pubs.aip.org
Coarse-grained (CG) simulation models of condensed-phase systems can be derived with
well-established methods that perform coarse-graining in space and provide an effective …
well-established methods that perform coarse-graining in space and provide an effective …
Multiscale coarse graining of liquid-state systems
A methodology is described to systematically derive coarse-grained (CG) force fields for
molecular liquids from the underlying atomistic-scale forces. The coarse graining of an …
molecular liquids from the underlying atomistic-scale forces. The coarse graining of an …
Bottom-up approach to represent dynamic properties in coarse-grained molecular simulations
G Deichmann, NFA van der Vegt - The Journal of Chemical Physics, 2018 - pubs.aip.org
Several molecular coarse-graining methods have been proposed in recent years to derive
chemical-and state-point transferable force fields. While these force fields describe structural …
chemical-and state-point transferable force fields. While these force fields describe structural …
Understanding missing entropy in coarse-grained systems: Addressing issues of representability and transferability
Coarse-grained (CG) models facilitate efficient simulation of complex systems by integrating
out the atomic, or fine-grained (FG), degrees of freedom. Systematically derived CG models …
out the atomic, or fine-grained (FG), degrees of freedom. Systematically derived CG models …
Accuracy, transferability, and efficiency of coarse-grained models of molecular liquids
Coarse-graining (CG) approaches are becoming essential tools in the study of complex
systems because they can considerably speed up computer simulations, with the promise of …
systems because they can considerably speed up computer simulations, with the promise of …
[HTML][HTML] A microcanonical approach to temperature-transferable coarse-grained models using the relative entropy
Bottom-up coarse-graining methods provide systematic tools for creating simplified models
of molecular systems. However, coarse-grained (CG) models produced with such methods …
of molecular systems. However, coarse-grained (CG) models produced with such methods …
Structural and thermodynamic consistency in coarse-grained models of macromolecules
MG Guenza - Journal of Physics: Conference Series, 2015 - iopscience.iop.org
Coarse-grained models of complex liquids are becoming increasingly important in
simulations of complex fluids because they substantially reduce computational time while …
simulations of complex fluids because they substantially reduce computational time while …
Bottom-up informed and iteratively optimized coarse-grained non-Markovian water models with accurate dynamics
V Klippenstein, NFA van der Vegt - Journal of Chemical Theory …, 2023 - ACS Publications
Molecular dynamics (MD) simulations based on coarse-grained (CG) particle models of
molecular liquids generally predict accelerated dynamics and misrepresent the time scales …
molecular liquids generally predict accelerated dynamics and misrepresent the time scales …
Introducing memory in coarse-grained molecular simulations
Preserving the correct dynamics at the coarse-grained (CG) level is a pressing problem in
the development of systematic CG models in soft matter simulation. Starting from the seminal …
the development of systematic CG models in soft matter simulation. Starting from the seminal …
[HTML][HTML] Dynamic force matching: A method for constructing dynamical coarse-grained models with realistic time dependence
Coarse-grained (CG) models of molecular systems, with fewer mechanical degrees of
freedom than an all-atom model, are used extensively in chemical physics. It is generally …
freedom than an all-atom model, are used extensively in chemical physics. It is generally …