Genomic asymmetric epigenetic modification of transposable elements is involved in gene expression regulation of allopolyploid Brassica napus

Y Xiao, Z Xi, F Wang, J Wang - The Plant Journal, 2024 - Wiley Online Library
Polyploids are common and have a wide geographical distribution and environmental
adaptability. Allopolyploidy may lead to the activation of transposable elements (TE) …

Epigenetic Regulation of Subgenomic Gene Expression in Allotetraploid Brassica napus

M Hu, Z Xi, J Wang - Plants, 2023 - mdpi.com
The allotetraploid Brasscia napus has now been extensively utilized to reveal the genetic
processes involved in hybridization and polyploidization. Here, transcriptome, WGBS, and …

The lack of negative association between TE load and subgenome dominance in synthesized Brassica allotetraploids

K Zhang, L Zhang, Y Cui, Y Yang… - Proceedings of the …, 2023 - National Acad Sciences
Polyploidization is important to the evolution of plants. Subgenome dominance is a distinct
phenomenon associated with most allopolyploids. A gene on the dominant subgenome …

Rapid alterations of gene expression and cytosine methylation in newly synthesized Brassica napus allopolyploids

Y Xu, L Zhong, X Wu, X Fang, J Wang - Planta, 2009 - Springer
Allopolyploidy is an important speciation mechanism and is ubiquitous among plants.
Brassica napus is a model system for studying the consequences of hybridization and …

[HTML][HTML] Gene expression changes during the allo-/deallopolyploidization process of Brassica napus

Q Pan, B Zhu, D Zhang, C Tong, X Ge, S Liu… - Frontiers in …, 2019 - frontiersin.org
Gene expression changes due to allopolyploidization have been extensively studied in
plants over the past few decades. Nearly all these studies focused on comparing the …

[PDF][PDF] Asymmetric epigenome maps of subgenomes reveal imbalanced transcription and distinct evolutionary trends in Brassica napus

Q Zhang, P Guan, L Zhao, M Ma, L Xie, Y Li, R Zheng… - Molecular plant, 2021 - cell.com
The complexity of the epigenome landscape and transcriptional regulation is significantly
increased during plant polyploidization, which drives genome evolution and contributes to …

Allopolyploidy has a moderate impact on restructuring at three contrasting transposable element insertion sites in resynthesized Brassica napus allotetraploids

V Sarilar, PM Palacios, A Rousselet, C Ridel… - New …, 2013 - Wiley Online Library
The role played by whole‐genome duplication (WGD) in evolution and adaptation is
particularly well illustrated in allopolyploids, where WGD is concomitant with interspecific …

Analysis of Transcriptional Changes in Different Brassica napus Synthetic Allopolyploids

Y Wei, G Li, S Zhang, S Zhang, H Zhang, R Sun… - Genes, 2021 - mdpi.com
Allopolyploidy is an evolutionary and mechanistically intriguing process involving the
reconciliation of two or more sets of diverged genomes and regulatory interactions, resulting …

Patterns of Sequence Loss and Cytosine Methylation within a Population of Newly Resynthesized Brassica napus Allopolyploids

LN Lukens, JC Pires, E Leon, R Vogelzang… - Plant …, 2006 - academic.oup.com
Allopolyploid formation requires the adaptation of two nuclear genomes within a single
cytoplasm, which may involve programmed genetic and epigenetic changes during the …

Asymmetric subgenomic chromatin architecture impacts on gene expression in resynthesized and natural allopolyploid Brassica napus

Z Li, M Li, J Wang - Communications Biology, 2022 - nature.com
Although asymmetric subgenomic epigenetic modification and gene expression have been
revealed in the successful establishment of allopolyploids, the changes in chromatin …