The dynamic regulation of G-quadruplex DNA structures by cytosine methylation

AJ Stevens, L de Jong, MA Kennedy - International Journal of Molecular …, 2022 - mdpi.com
It is well known that certain non B-DNA structures, including G-quadruplexes, are key
elements that can regulate gene expression. Here, we explore the theory that DNA …

Epigenetic modulation of chromatin states and gene expression by G-quadruplex structures

C Reina, V Cavalieri - International Journal of Molecular Sciences, 2020 - mdpi.com
G-quadruplexes are four-stranded helical nucleic acid structures formed by guanine-rich
sequences. A considerable number of studies have revealed that these noncanonical …

DNA methylation is regulated by both the stability and topology of G-quadruplex

S Matsumoto, H Tateishi-Karimata… - Chemical …, 2022 - pubs.rsc.org
Since DNA methylation alters the chromatin state and regulates gene expression,
elucidating the regulatory mechanisms of DNA methylation in response to environmental …

An Upstream G-Quadruplex DNA Structure Can Stimulate Gene Transcription

Y Chen, A Simeone, L Melidis, SM Cuesta… - ACS Chemical …, 2024 - ACS Publications
Four-stranded G-quadruplexes (G4s) are DNA secondary structures that can form in the
human genome. G4 structures have been detected in gene promoters and are associated …

DNA secondary structures: stability and function of G-quadruplex structures

ML Bochman, K Paeschke, VA Zakian - Nature Reviews Genetics, 2012 - nature.com
In addition to the canonical double helix, DNA can fold into various other inter-and
intramolecular secondary structures. Although many such structures were long thought to be …

The regulation and functions of DNA and RNA G-quadruplexes

D Varshney, J Spiegel, K Zyner, D Tannahill… - … reviews Molecular cell …, 2020 - nature.com
DNA and RNA can adopt various secondary structures. Four-stranded G-quadruplex (G4)
structures form through self-recognition of guanines into stacked tetrads, and considerable …

Quadruplexes and the biology of G-rich genomic regions

N Maizels - Quadruplex Nucleic Acids, 2006 - books.google.com
When we picture DNA, the image that comes immediately to mind is the iconic double helix.
However, the double helix is only the storage form for genetic information, and DNA takes on …

Stable G-quadruplexes are found outside nucleosome-bound regions

HM Wong, JL Huppert - Molecular BioSystems, 2009 - pubs.rsc.org
Unusual DNA structures such as four-stranded G-quadruplexes have been found to form in
vivo and to play regulatory roles. However, since DNA is normally present as chromatin, with …

Fundamentals of G-quadruplex biology

FB Johnson - Annual reports in medicinal chemistry, 2020 - Elsevier
Several decades elapsed between the first descriptions of G-quadruplex nucleic acid
structures (G4s) assembled in vitro and the emergence of experimental findings indicating …

Structure, location and interactions of G‐quadruplexes

JL Huppert - The FEBS journal, 2010 - Wiley Online Library
Four‐stranded G‐rich DNA structures called G‐quadruplexes have been the subject of
increasing interest recently. Experimental and computational techniques have been used to …