Effect of the RNA pyrophosphohydrolase RppH on envelope integrity in Escherichia coli

U Choi, YH Park, YR Kim, YJ Seok… - FEMS Microbiology …, 2017 - academic.oup.com
The bacterial enzyme RppH initiates mRNA decay by removing pyrophosphate from 5΄-
triphosphorylated mRNA. Escherichia coli RppH has promiscuous substrate specificity, but …

[HTML][HTML] Specificity and evolutionary conservation of the Escherichia coli RNA pyrophosphohydrolase RppH

PL Foley, P Hsieh, DJ Luciano, JG Belasco - Journal of Biological …, 2015 - ASBMB
Background: In bacteria, RppH triggers mRNA degradation by converting the 5′-terminal
triphosphate to a monophosphate. Results: The substrate specificity of E. coli RppH has …

Importance of a diphosphorylated intermediate for RppH-dependent RNA degradation

DJ Luciano, N Vasilyev, J Richards, A Serganov… - RNA biology, 2018 - Taylor & Francis
Deprotection of the 5′ end appears to be a universal mechanism for triggering the
degradation of mRNA in bacteria and eukaryotes. In Escherichia coli, for example …

1H, 13C and 15N resonance assignments of RNA pyrophosphohydrolase RppH from Escherichia coli

Y Bi, H Li, S Fan, B Xia, C Jin - Biomolecular NMR assignments, 2009 - Springer
The mRNA degradation is an important regulatory mechanism which controls gene
expression by limiting the number of translation times. Previous studies demonstrated that …

RppH-dependent pyrophosphohydrolysis of mRNAs is regulated by direct interaction with DapF in Escherichia coli

CR Lee, M Kim, YH Park, YR Kim… - Nucleic acids …, 2014 - academic.oup.com
Similar to decapping of eukaryotic mRNAs, the RppH-catalyzed conversion of 5′-terminal
triphosphate to monophosphate has recently been identified as the rate-limiting step for the …

[HTML][HTML] Structures of RNA complexes with the Escherichia coli RNA pyrophosphohydrolase RppH unveil the basis for specific 5′-end-dependent mRNA decay

N Vasilyev, A Serganov - Journal of Biological Chemistry, 2015 - ASBMB
Background: RppH initiates mRNA degradation in bacteria by removing pyrophosphate from
the triphosphorylated 5′ terminus. Results: X-ray structures of E. coli RppH have revealed …

Influence of translation on RppH‐dependent mRNA degradation in Escherichia coli

J Richards, DJ Luciano, JG Belasco - Molecular microbiology, 2012 - Wiley Online Library
In E scherichia coli, the endonuclease RNase E can access internal cleavage sites in mRNA
either directly or by a 5′ end‐dependent mechanism in which cleavage is facilitated by …

Specificity of RppH-dependent RNA degradation in Bacillus subtilis

P Hsieh, J Richards, Q Liu… - Proceedings of the …, 2013 - National Acad Sciences
Bacterial RNA degradation often begins with conversion of the 5′-terminal triphosphate to
a monophosphate, creating a better substrate for subsequent ribonuclease digestion. For …

DapF stabilizes the substrate-favoring conformation of RppH to stimulate its RNA-pyrophosphohydrolase activity in Escherichia coli

Q Wang, D Zhang, Z Guan, D Li, K Pei… - Nucleic Acids …, 2018 - academic.oup.com
Abstract mRNA decay is an important strategy by which bacteria can rapidly adapt to their
ever-changing surroundings. The 5′-terminus state of mRNA determines the velocity of …

[HTML][HTML] A novel RNA phosphorylation state enables 5′ end-dependent degradation in Escherichia coli

DJ Luciano, N Vasilyev, J Richards, A Serganov… - Molecular cell, 2017 - cell.com
RNA modifications that once escaped detection are now thought to be pivotal for governing
RNA lifetimes in both prokaryotes and eukaryotes. For example, converting the 5′-terminal …