GlycoPOST realizes FAIR principles for glycomics mass spectrometry data

Y Watanabe, KF Aoki-Kinoshita… - Nucleic acids …, 2021 - academic.oup.com
For the reproducibility and sustainability of scientific research, FAIRness (Findable,
Accessible, Interoperable and Re-usable), with respect to the release of raw data obtained …

Mass spectrometry and glycomics

J Zaia - Omics: a journal of integrative biology, 2010 - liebertpub.com
Glycosylation defines the adhesive properties of animal cell surfaces and the surrounding
extracellular environments. Because cells respond to stimuli by altering glycan expression …

The minimum information required for a glycomics experiment (MIRAGE) project: sample preparation guidelines for reliable reporting of glycomics datasets

WB Struwe, S Agravat, KF Aoki-Kinoshita… - …, 2016 - academic.oup.com
The minimum information required for a glycomics experiment (MIRAGE) project was
established in 2011 to provide guidelines to aid in data reporting from all types of …

MIRAGE: the minimum information required for a glycomics experiment

WS York, S Agravat, KF Aoki-Kinoshita, R McBride… - …, 2014 - academic.oup.com
The MIRAGE (minimum information required for a glycomics experiment) initiative was
founded in Seattle, WA, in November 2011 in order to develop guidelines for reporting the …

The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting mass-spectrometry-based glycoanalytic data

D Kolarich, E Rapp, WB Struwe, SM Haslam… - Molecular & cellular …, 2013 - ASBMB
The MIRAGE guidelines are being developed in response to a critical need in the
glycobiology community to clarify glycoanalytic results so that they are more readily …

Mass spectrometry and the emerging field of glycomics

J Zaia - Chemistry & biology, 2008 - cell.com
The biological significance of protein and lipid glycosylation is well established. For
example, cells respond to environmental stimuli by altering glycan structures on their …

GlycoWorkbench: a tool for the computer-assisted annotation of mass spectra of glycans

A Ceroni, K Maass, H Geyer, R Geyer… - Journal of proteome …, 2008 - ACS Publications
Mass spectrometry is the main analytical technique currently used to address the challenges
of glycomics as it offers unrivalled levels of sensitivity and the ability to handle complex …

High-throughput analysis and automation for glycomics studies

A Shubhakar, KR Reiding, RA Gardner, DIR Spencer… - Chromatographia, 2015 - Springer
This review covers advances in analytical technologies for high-throughput (HTP) glycomics.
Our focus is on structural studies of glycoprotein glycosylation to support biopharmaceutical …

GlycoMob: an ion mobility-mass spectrometry collision cross section database for glycomics

WB Struwe, K Pagel, JLP Benesch, DJ Harvey… - Glycoconjugate …, 2016 - Springer
Ion mobility mass spectrometry (IM-MS) is a promising analytical technique for glycomics
that separates glycan ions based on their collision cross section (CCS) and provides glycan …

Towards a standardized bioinformatics infrastructure for N- and O-glycomics

MA Rojas-Macias, J Mariethoz, P Andersson… - Nature …, 2019 - nature.com
The mass spectrometry (MS)-based analysis of free polysaccharides and glycans released
from proteins, lipids and proteoglycans increasingly relies on databases and software. Here …