Improved genomic prediction of clonal performance in sugarcane by exploiting non-additive genetic effects

S Yadav, X Wei, P Joyce, F Atkin, E Deomano… - Theoretical and Applied …, 2021 - Springer
Key message Non-additive genetic effects seem to play a substantial role in the expression
of complex traits in sugarcane. Including non-additive effects in genomic prediction models …

Accuracy of genomic prediction of complex traits in sugarcane

BJ Hayes, X Wei, P Joyce, F Atkin, E Deomano… - Theoretical and Applied …, 2021 - Springer
Key message Complex traits in sugarcane can be accurately predicted using genome-wide
DNA markers. Genomic single-step prediction is an attractive method for genomic selection …

Genomic prediction of sugar content and cane yield in sugar cane clones in different stages of selection in a breeding program, with and without pedigree information

E Deomano, P Jackson, X Wei, K Aitken, R Kota… - Molecular …, 2020 - Springer
High cane yield and commercially extractable sucrose (CCS) content are two of the key
sugarcane commercial traits selected in sugarcane breeding programs. Advancements in …

Accelerating genetic gain in sugarcane breeding using genomic selection

S Yadav, P Jackson, X Wei, EM Ross, K Aitken… - Agronomy, 2020 - mdpi.com
Sugarcane is a major industrial crop cultivated in tropical and subtropical regions of the
world. It is the primary source of sugar worldwide, accounting for more than 70% of world …

Strategies and considerations for implementing genomic selection to improve traits with additive and non-additive genetic architectures in sugarcane breeding

KP Voss-Fels, X Wei, EM Ross, M Frisch… - Theoretical and Applied …, 2021 - Springer
Key message Simulations highlight the potential of genomic selection to substantially
increase genetic gain for complex traits in sugarcane. The success rate depends on the trait …

Experimental assessment of the accuracy of genomic selection in sugarcane

M Gouy, Y Rousselle, D Bastianelli, P Lecomte… - Theoretical and applied …, 2013 - Springer
Sugarcane cultivars are interspecific hybrids with an aneuploid, highly heterozygous
polyploid genome. The complexity of the sugarcane genome is the main obstacle to the use …

Estimating the potential of sugarcane families to produce elite genotypes using univariate cross prediction methods

YS Chang, SB Milligan - Theoretical and Applied Genetics, 1992 - Springer
A quick, accurate method to determine the potential of a sugarcane (Saccharum spp.) cross
to produce elite progeny is needed for maximizing genetic gain. Development of a practical …

Genomic prediction with allele dosage information in highly polyploid species

LG Batista, VH Mello, AP Souza… - Theoretical and Applied …, 2022 - Springer
Key message Including allele, dosage can improve genomic selection in highly polyploid
species under higher frequency of different heterozygous genotypic classes and high …

Analysis of genome-wide linkage disequilibrium in the highly polyploid sugarcane

LM Raboin, J Pauquet, M Butterfield, A D'Hont… - Theoretical and Applied …, 2008 - Springer
Linkage disequilibrium (LD) in crops, established by domestication and early breeding, can
be a valuable basis for mapping the genome. We undertook an assessment of LD in …

Estimating the potential of sugarcane families to produce elite genotypes using bivariate prediction methods

YS Chang, SB Milligan - Theoretical and Applied Genetics, 1992 - Springer
Three bivariate statistical methods to predict the family potential to produce elite progeny
were studied to improve the efficiency of a sugarcane (Saccharum spp.) breeding program …