Sensitivity to DNase I digestion is an indicator of the accessibility and configuration of
chromatin in eukaryotic genomes. Open chromatin exhibits high sensitivity to DNase I …

Genomic regions associated with regulatory proteins are known to be highly sensitive to
DNase I digestion and are termed DNase I hypersensitive sites (DHSs). DHSs can be …

Highlights•Open chromatin and DNase I hypersensitive sites (DHSs).•Genome-wide
identification and characterization of DHSs by DNase-seq.•DHS dynamics associated with …

Gene expression and regulation in eukaryotes is controlled by orchestrated binding of
regulatory proteins, including both activators and repressors, to promoters and other cis …

DNase I hypersensitive site (DHS) mapping combined with high‐throughput sequencing
(DNase‐seq) enables the identification of cis‐regulatory DNA elements (CREs) genome …

Deep sequencing of DNase-I treated chromatin (DNase-seq) can be used to identify DNase
I-hypersensitive sites (DHSs) and facilitates genome-scale mining of de novo cis-regulatory …

Recent genome-wide analyses of yeast and human chromatin revealed the widespread
prevalence of DNase I hypersensitive sites (DNase I HSs) at gene regulatory regions with …

Gene expression is regulated by orchestrated binding of regulatory proteins to promoters
and other cis-regulatory DNA elements (CREs). Several plant databases have been …

Understanding gene regulatory networks in plants requires knowledge of cis-regulatory
DNA, trans-acting factors, and their dynamics across development and in response to …

Expression of the eukaryotic genome is a highly complex and tightly regulated process, and
its regulation depends on interactions among cis-acting elements and transcription factors …