EMDB—the electron microscopy data bank
Nucleic acids research, 2024 - academic.oup.com
Abstract The Electron Microscopy Data Bank (EMDB) is the global public archive of three-
dimensional electron microscopy (3DEM) maps of biological specimens derived from …
dimensional electron microscopy (3DEM) maps of biological specimens derived from …
EMDB web resources
S Abbott, A Iudin, PK Korir… - Current protocols in …, 2018 - Wiley Online Library
Abstract The Electron Microscopy Data Bank (EMDB) is a global, openly accessible archive
of biomolecular and cellular 3‐D reconstructions derived from electron microscopy (EM) …
of biomolecular and cellular 3‐D reconstructions derived from electron microscopy (EM) …
EMDataBank unified data resource for 3DEM
CL Lawson, A Patwardhan, ML Baker… - Nucleic acids …, 2016 - academic.oup.com
Abstract Three-dimensional Electron Microscopy (3DEM) has become a key experimental
method in structural biology for a broad spectrum of biological specimens from molecules to …
method in structural biology for a broad spectrum of biological specimens from molecules to …
[HTML][HTML] Outcome of the first electron microscopy validation task force meeting
R Henderson, A Sali, ML Baker, B Carragher… - Structure, 2012 - cell.com
This Meeting Review describes the proceedings and conclusions from the inaugural
meeting of the Electron Microscopy Validation Task Force organized by the Unified Data …
meeting of the Electron Microscopy Validation Task Force organized by the Unified Data …
[HTML][HTML] Electron microscopy holdings of the Protein Data Bank: the impact of the resolution revolution, new validation tools, and implications for the future
As a discipline, structural biology has been transformed by the three-dimensional electron
microscopy (3DEM)“Resolution Revolution” made possible by convergence of robust cryo …
microscopy (3DEM)“Resolution Revolution” made possible by convergence of robust cryo …
[HTML][HTML] Data management challenges in three-dimensional EM
A Patwardhan, JM Carazo, B Carragher… - Nature structural & …, 2012 - nature.com
This report describes the outcomes of the Data Management Challenges in 3D Electron
Microscopy workshop. Key topics discussed include data models, validation and raw-data …
Microscopy workshop. Key topics discussed include data models, validation and raw-data …
EMPIAR: a public archive for raw electron microscopy image data
A Iudin, PK Korir, J Salavert-Torres, GJ Kleywegt… - Nature …, 2016 - nature.com
In discussions at workshops 1, 2 and conferences, the cryo-electron microscopy (EM)
community has repeatedly expressed the need for public archiving of raw 2D image data to …
community has repeatedly expressed the need for public archiving of raw 2D image data to …
Common conventions for interchange and archiving of three-dimensional electron microscopy information in structural biology
JB Heymann, M Chagoyen, DM Belnap - Journal of structural biology, 2005 - Elsevier
Three-dimensional electron microscopy (3DEM) has made significant contributions to
structural biology. To accomplish this feat, many image-processing software packages were …
structural biology. To accomplish this feat, many image-processing software packages were …
The cell centered database project: an update on building community resources for managing and sharing 3D imaging data
ME Martone, J Tran, WW Wong, J Sargis, L Fong… - Journal of structural …, 2008 - Elsevier
Databases have become integral parts of data management, dissemination, and mining in
biology. At the Second Annual Conference on Electron Tomography, held in Amsterdam in …
biology. At the Second Annual Conference on Electron Tomography, held in Amsterdam in …
[HTML][HTML] Web-based visualisation and analysis of 3D electron-microscopy data from EMDB and PDB
I Lagerstedt, WJ Moore, A Patwardhan… - Journal of structural …, 2013 - Elsevier
Abstract The Protein Data Bank in Europe (PDBe) has developed web-based tools for the
visualisation and analysis of 3D electron microscopy (3DEM) structures in the Electron …
visualisation and analysis of 3D electron microscopy (3DEM) structures in the Electron …