[HTML][HTML] Methods for the integration of multi-omics data: mathematical aspects

M Bersanelli, E Mosca, D Remondini, E Giampieri… - BMC …, 2016 - Springer
Background Methods for the integrative analysis of multi-omics data are required to draw a
more complete and accurate picture of the dynamics of molecular systems. The complexity …

Biological insights through omics data integration

E Noor, S Cherkaoui, U Sauer - Current Opinion in Systems Biology, 2019 - Elsevier
The number of studies that collect and publish large-scale multiomics data is rapidly
increasing. So far, we have not realized the full potential of the biological insights that can be …

[HTML][HTML] Computational approaches for network-based integrative multi-omics analysis

FE Agamah, JR Bayjanov, A Niehues… - Frontiers in Molecular …, 2022 - frontiersin.org
Advances in omics technologies allow for holistic studies into biological systems. These
studies rely on integrative data analysis techniques to obtain a comprehensive view of the …

[HTML][HTML] Ten quick tips for avoiding pitfalls in multi-omics data integration analyses

D Chicco, F Cumbo, C Angione - PLOS Computational Biology, 2023 - journals.plos.org
Data are the most important elements of bioinformatics: Computational analysis of
bioinformatics data, in fact, can help researchers infer new knowledge about biology …

integrOmics: an R package to unravel relationships between two omics datasets

KA Lê Cao, I González, S Déjean - Bioinformatics, 2009 - academic.oup.com
Motivation: With the availability of many 'omics' data, such as transcriptomics, proteomics or
metabolomics, the integrative or joint analysis of multiple datasets from different technology …

Multi-omics data integration, interpretation, and its application

I Subramanian, S Verma, S Kumar… - … and biology insights, 2020 - journals.sagepub.com
To study complex biological processes holistically, it is imperative to take an integrative
approach that combines multi-omics data to highlight the interrelationships of the involved …

Analysis of metabolomic data: tools, current strategies and future challenges for omics data integration

A Cambiaghi, M Ferrario… - Briefings in bioinformatics, 2017 - academic.oup.com
Metabolomics is a rapidly growing field consisting of the analysis of a large number of
metabolites at a system scale. The two major goals of metabolomics are the identification of …

[HTML][HTML] Integration strategies of multi-omics data for machine learning analysis

M Picard, MP Scott-Boyer, A Bodein, O Périn… - Computational and …, 2021 - Elsevier
Increased availability of high-throughput technologies has generated an ever-growing
number of omics data that seek to portray many different but complementary biological …

[HTML][HTML] Vertical and horizontal integration of multi-omics data with miodin

B Ulfenborg - BMC bioinformatics, 2019 - Springer
Background Studies on multiple modalities of omics data such as transcriptomics, genomics
and proteomics are growing in popularity, since they allow us to investigate complex …

Multi-omics integration in biomedical research–A metabolomics-centric review

MA Wörheide, J Krumsiek, G Kastenmüller… - Analytica chimica …, 2021 - Elsevier
Recent advances in high-throughput technologies have enabled the profiling of multiple
layers of a biological system, including DNA sequence data (genomics), RNA expression …