The Genome 10K Project: a way forward

KP Koepfli, B Paten… - Annu. Rev. Anim …, 2015 - annualreviews.org
The Genome 10K Project was established in 2009 by a consortium of biologists and
genome scientists determined to facilitate the sequencing and analysis of the complete …

Genome 10K: a proposal to obtain whole-genome sequence for 10 000 vertebrate species

Genome 10K Community of Scientists - Journal of Heredity, 2009 - academic.oup.com
The human genome project has been recently complemented by whole-genome
assessment sequence of 32 mammals and 24 nonmammalian vertebrate species suitable …

Toward a genome sequence for every animal: Where are we now?

S Hotaling, JL Kelley… - Proceedings of the …, 2021 - National Acad Sciences
In less than 25 y, the field of animal genome science has transformed from a discipline
seeking its first glimpses into genome sequences across the Tree of Life to a global …

Whole-genome alignment and comparative annotation

J Armstrong, IT Fiddes, M Diekhans… - Annual review of …, 2019 - annualreviews.org
Rapidly improving sequencing technology coupled with computational developments in
sequence assembly are making reference-quality genome assembly economical. Hundreds …

Comparative genomic data of the Avian Phylogenomics Project

G Zhang, B Li, C Li, MTP Gilbert, ED Jarvis… - …, 2014 - academic.oup.com
Background The evolutionary relationships of modern birds are among the most challenging
to understand in systematic biology and have been debated for centuries. To address this …

Genome evolution in Reptilia, the sister group of mammals

DE Janes, CL Organ, MK Fujita… - Annual review of …, 2010 - annualreviews.org
The genomes of birds and nonavian reptiles (Reptilia) are critical for understanding genome
evolution in mammals and amniotes generally. Despite decades of study at the …

Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K)

G Fan, Y Song, L Yang, X Huang, S Zhang… - …, 2020 - academic.oup.com
Background With more than 30,000 species, fish—including bony, jawless, and
cartilaginous fish—are the largest vertebrate group, and include some of the earliest …

The Global Invertebrate Genomics Alliance (GIGA): developing community resources to study diverse invertebrate genomes

GIGA Community of Scientists - Journal of Heredity, 2014 - academic.oup.com
Over 95% of all metazoan (animal) species comprise the “invertebrates,” but very few
genomes from these organisms have been sequenced. We have, therefore, formed a …

Upgrading short-read animal genome assemblies to chromosome level using comparative genomics and a universal probe set

J Damas, R O'Connor, M Farré, VPE Lenis… - Genome …, 2017 - genome.cshlp.org
Most recent initiatives to sequence and assemble new species' genomes de novo fail to
achieve the ultimate endpoint to produce contigs, each representing one whole …

Threatened Species Initiative: Empowering conservation action using genomic resources

CJ Hogg, K Ottewell, P Latch… - Proceedings of the …, 2022 - National Acad Sciences
Globally, 15,521 animal species are listed as threatened by the International Union for the
Conservation of Nature, and of these less than 3% have genomic resources that can inform …