[HTML][HTML] A human genome structural variation sequencing resource reveals insights into mutational mechanisms

JM Kidd, T Graves, TL Newman, R Fulton, HS Hayden… - Cell, 2010 - cell.com
Understanding the prevailing mutational mechanisms responsible for human genome
structural variation requires uniformity in the discovery of allelic variants and precision in …

Nucleotide-resolution analysis of structural variants using BreakSeq and a breakpoint library

HYK Lam, XJ Mu, AM Stütz, A Tanzer, PD Cayting… - Nature …, 2010 - nature.com
Structural variants (SVs) are a major source of human genomic variation; however,
characterizing them at nucleotide resolution remains challenging. Here we assemble a …

Fine-scale structural variation of the human genome

E Tuzun, AJ Sharp, JA Bailey, R Kaul, VA Morrison… - Nature …, 2005 - nature.com
Inversions, deletions and insertions are important mediators of disease and disease
susceptibility. We systematically compared the human genome reference sequence with a …

Paired-end mapping reveals extensive structural variation in the human genome

JO Korbel, AE Urban, JP Affourtit, B Godwin, F Grubert… - Science, 2007 - science.org
Structural variation of the genome involves kilobase-to megabase-sized deletions,
duplications, insertions, inversions, and complex combinations of rearrangements. We …

[HTML][HTML] Hotspots of human mutation

AV Nesta, D Tafur, CR Beck - Trends in Genetics, 2021 - cell.com
Mutation of the human genome results in three classes of genomic variation: single
nucleotide variants; short insertions or deletions; and large structural variants (SVs). Some …

Characteristics of de novo structural changes in the human genome

WP Kloosterman, LC Francioli, F Hormozdiari… - Genome …, 2015 - genome.cshlp.org
Small insertions and deletions (indels) and large structural variations (SVs) are major
contributors to human genetic diversity and disease. However, mutation rates and …

[HTML][HTML] Multi-platform discovery of haplotype-resolved structural variation in human genomes

MJP Chaisson, AD Sanders, X Zhao, A Malhotra… - Nature …, 2019 - nature.com
The incomplete identification of structural variants (SVs) from whole-genome sequencing
data limits studies of human genetic diversity and disease association. Here, we apply a …

Genome structural variation discovery and genotyping

C Alkan, BP Coe, EE Eichler - Nature reviews genetics, 2011 - nature.com
Comparisons of human genomes show that more base pairs are altered as a result of
structural variation—including copy number variation—than as a result of point mutations …

The population genetics of structural variation

DF Conrad, ME Hurles - Nature genetics, 2007 - nature.com
Population genetics is central to our understanding of human variation, and by linking
medical and evolutionary themes, it enables us to understand the origins and impacts of our …

Genome assembly comparison identifies structural variants in the human genome

R Khaja, J Zhang, JR MacDonald, Y He… - Nature …, 2006 - nature.com
Numerous types of DNA variation exist, ranging from SNPs to larger structural alterations
such as copy number variants (CNVs) and inversions. Alignment of DNA sequence from …