Background Human immunodeficiency virus (HIV)-1 genetic diversity increases during
infection and can help infer the time elapsed since infection. However, the effect of …

HIV genetic diversity informs stage of HIV-1 infection among patients receiving antiretroviral
therapy in Botswana Page 1 © The Author(s) 2021. Published by Oxford University Press for …

Background Human immunodeficiency virus type 1 (HIV-1) genetic diversity increases over
the course of infection and can be used to infer the time since infection and, consequently …

Background Differences between HIV genotypes may affect HIV disease progression. We
examined infecting HIV genotypes and their association with disease progression in a …

Estimating the time since infection (TI) in newly diagnosed HIV-1 patients is challenging, but
important to understand the epidemiology of the infection. Here we explore the utility of virus …

HIV-1 RNA genetic diversity predicts time since infection, which is important for clinical care
and research. It is unclear, however, whether proviral DNA genetic diversity sampled under …

Intrahost human immunodeficiency virus (HIV)-1 diversity increases linearly over time. We
assessed the extent to which mean pairwise distances and the time to the most recent …

In clinical settings, we have found a high rate of human immunodeficiency virus (HIV) drug
resistance among antiretroviral-naive patients for whom the duration of infection was …

Background Cross-sectional, biomarker methods to determine HIV infection recency present
a promising and cost-effective alternative to the repeated testing of uninfected individuals …

Background Infection with human immunodeficiency virus type 1 (HIV) typically results from
transmission of a small and genetically uniform viral population. Following transmission, the …