Codon usage patterns across seven Rosales species
Y Zhang, Z Shen, X Meng, L Zhang, Z Liu, M Liu… - BMC plant biology, 2022 - Springer
Background Codon usage bias (CUB) analysis is an effective method for studying specificity,
evolutionary relationships, and mRNA translation and discovering new genes among …
evolutionary relationships, and mRNA translation and discovering new genes among …
Patterns of genome-wide codon usage bias in tobacco, tomato and potato
Understanding codon usage patterns and their shaping factors in members of the
Solanaceae family may reflect important features of their evolutionary history. Here, we …
Solanaceae family may reflect important features of their evolutionary history. Here, we …
Deciphering Codon Usage Patterns in Genome of Cucumis sativus in Comparison with Nine Species of Cucurbitaceae
Y Niu, Y Luo, C Wang, W Liao - Agronomy, 2021 - mdpi.com
Cucumber is the most important vegetable crop in the Cucurbitaceae family. Condon usage
bias (CUB) is a valuable character of species evolution. However, there is little research on …
bias (CUB) is a valuable character of species evolution. However, there is little research on …
Analysis of Synonymous Codon Usage Patterns in Seven Different Citrus Species
C Xu, J Dong, C Tong, X Gong… - Evolutionary …, 2013 - journals.sagepub.com
We used large samples of expressed sequence tags to characterize the patterns of codon
usage bias (CUB) in seven different Citrus species and to analyze their evolutionary effect …
usage bias (CUB) in seven different Citrus species and to analyze their evolutionary effect …
Comparative analysis of codon usage patterns in chloroplast genomes of the Asteraceae family
X Nie, P Deng, K Feng, P Liu, X Du, FM You… - Plant molecular biology …, 2014 - Springer
Codon usage bias (CUB) is an important evolutionary feature in a genome and has been
widely documented from prokaryotes to eukaryotes. However, the significance of CUB in the …
widely documented from prokaryotes to eukaryotes. However, the significance of CUB in the …
Analysis of codon usage patterns in citrus based on coding sequence data
Background Codon usage is an important determinant of gene expression levels that can
help us understand codon biology, evolution and mRNA translation of species. The majority …
help us understand codon biology, evolution and mRNA translation of species. The majority …
Deciphering codon usage patterns and evolutionary forces in chloroplast genes of Camellia sinensis var. assamica and Camellia sinensis var. sinensis in comparison …
S Yengkhom, A Uddin, S Chakraborty - Journal of Integrative Agriculture, 2019 - Elsevier
Codon usage bias (CUB) is a unique property of genome which refers to non-random usage
of synonymous codons in coding sequences. The present study makes an attempt to find out …
of synonymous codons in coding sequences. The present study makes an attempt to find out …
Genome-wide comparative analysis of the codon usage patterns in plants
N Li, Y Li, C Zheng, J Huang, S Zhang - Genes & Genomics, 2016 - Springer
Codon usage analysis has been a classical area of study for decades and is important for
evolution, mRNA translation, and new gene discovery. Recently, genome sequencing has …
evolution, mRNA translation, and new gene discovery. Recently, genome sequencing has …
Codon usage patterns in Chinese bayberry (Myrica rubra) based on RNA-Seq data
Background Codon usage analysis has been a classical topic for decades and has
significances for studies of evolution, mRNA translation, and new gene discovery, etc. While …
significances for studies of evolution, mRNA translation, and new gene discovery, etc. While …
Genome-wide analysis of codon usage bias in four sequenced cotton species
L Wang, H Xing, Y Yuan, X Wang, M Saeed, J Tao… - PloS one, 2018 - journals.plos.org
Codon usage bias (CUB) is an important evolutionary feature in a genome which provides
important information for studying organism evolution, gene function and exogenous gene …
important information for studying organism evolution, gene function and exogenous gene …