Genome-wide association study of rice (Oryza sativa L.) leaf traits with a high-throughput leaf scorer

W Yang, Z Guo, C Huang, K Wang… - Journal of …, 2015 - academic.oup.com
Leaves are the plant's solar panel and food factory, and leaf traits are always key issues to
investigate in plant research. Traditional methods for leaf trait measurement are time …

[HTML][HTML] Genome-wide association mapping of leaf mass traits in a Vietnamese rice landrace panel

GT Hoang, P Gantet, KH Nguyen, NTP Phung, LT Ha… - Plos one, 2019 - journals.plos.org
Leaf traits are often strongly correlated with yield, which poses a major challenge in rice
breeding. In the present study, using a panel of Vietnamese rice landraces genotyped with …

[HTML][HTML] Genetic variation and association mapping for 12 agronomic traits in indica rice

Q Lu, M Zhang, X Niu, S Wang, Q Xu, Y Feng, C Wang… - BMC genomics, 2015 - Springer
Abstract Background Increasing rice (Oryza sativa L.) yield is a crucial challenge for modern
agriculture. The ideal plant architecture is considered to be critical to enhance rice yield …

[HTML][HTML] Multi-locus genome-wide association studies for five yield-related traits in rice

H Zhong, S Liu, T Sun, W Kong, X Deng, Z Peng, Y Li - BMC Plant Biology, 2021 - Springer
Background Improving the overall production of rice with high quality is a major target of
breeders. Mining potential yield-related loci have been geared towards developing efficient …

Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor‐made rice with enhanced …

R Abbai, VK Singh, VV Nachimuthu… - Plant biotechnology …, 2019 - Wiley Online Library
Though several genes governing various major traits have been reported in rice, their
superior haplotype combinations for developing ideal variety remains elusive. In this study …

[HTML][HTML] Genome-wide association study of important agronomic traits within a core collection of rice (Oryza sativa L.)

P Zhang, K Zhong, Z Zhong, H Tong - BMC plant biology, 2019 - Springer
Abstract Background Cultivated rice (Oryza sativa L.) is one of the staple food for over half of
the world's population. Thus, improvement of cultivated rice is important for the development …

Investigation of the genetic diversity of a rice core collection of Japanese landraces using whole-genome sequencing

N Tanaka, M Shenton, Y Kawahara… - Plant and Cell …, 2020 - academic.oup.com
Abstract The Rice Core Collection of Japanese Landraces (JRC) consisting of 50
accessions was developed by the genebank at the National Agriculture and Food Research …

[HTML][HTML] Genome-wide association study for traits related to plant and grain morphology, and root architecture in temperate rice accessions

F Biscarini, P Cozzi, L Casella, P Riccardi, A Vattari… - PLoS one, 2016 - journals.plos.org
Background In this study we carried out a genome-wide association analysis for plant and
grain morphology and root architecture in a unique panel of temperate rice accessions …

[HTML][HTML] An efficient strategy combining SSR markers-and advanced QTL-seq-driven QTL mapping unravels candidate genes regulating grain weight in rice

A Daware, S Das, R Srivastava, S Badoni… - Frontiers in plant …, 2016 - frontiersin.org
Development and use of genome-wide informative simple sequence repeat (SSR) markers
and novel integrated genomic strategies are vital to drive genomics-assisted breeding …

Gene based markers improve precision of genome-wide association studies and accuracy of genomic predictions in rice breeding

C Anilkumar, TP Muhammed Azharudheen, RP Sah… - Heredity, 2023 - nature.com
It is hypothesized that the genome-wide genic markers may increase the prediction accuracy
of genomic selection for quantitative traits. To test this hypothesis, a set of candidate gene …