TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment

D Sun, J Wang, Y Han, X Dong, J Ge… - Nucleic acids …, 2021 - academic.oup.com
Cancer immunotherapy targeting co-inhibitory pathways by checkpoint blockade shows
remarkable efficacy in a variety of cancer types. However, only a minority of patients respond …

The current landscape of single-cell transcriptomics for cancer immunotherapy

P Guruprasad, YG Lee, KH Kim, M Ruella - Journal of Experimental …, 2020 - rupress.org
Immunotherapies such as immune checkpoint blockade and adoptive cell transfer have
revolutionized cancer treatment, but further progress is hindered by our limited …

RNA sequencing of the tumor microenvironment in precision cancer immunotherapy

D Lau, AM Bobe, AA Khan - Trends in cancer, 2019 - cell.com
RNA sequencing (RNA-seq) provides an efficient high-throughput technique to robustly
characterize the tumor immune microenvironment (TME). The increasing use of RNA-seq in …

Insights gained from single-cell analysis of immune cells in the tumor microenvironment

X Ren, L Zhang, Y Zhang, Z Li… - Annual review of …, 2021 - annualreviews.org
Understanding tumor immune microenvironments is critical for identifying immune modifiers
of cancer progression and developing cancer immunotherapies. Recent applications of …

[HTML][HTML] Interpretable systems biomarkers predict response to immune-checkpoint inhibitors

Ó Lapuente-Santana, M van Genderen, PAJ Hilbers… - Patterns, 2021 - cell.com
Cancer cells can leverage several cell-intrinsic and-extrinsic mechanisms to escape
immune system recognition. The inherent complexity of the tumor microenvironment, with its …

TISCH2: expanded datasets and new tools for single-cell transcriptome analyses of the tumor microenvironment

Y Han, Y Wang, X Dong, D Sun, Z Liu… - Nucleic acids …, 2023 - academic.oup.com
Abstract The Tumor Immune Single Cell Hub 2 (TISCH2) is a resource of single-cell RNA-
seq (scRNA-seq) data from human and mouse tumors, which enables comprehensive …

[HTML][HTML] Deep immunophenotyping at the single-cell level identifies a combination of anti-IL-17 and checkpoint blockade as an effective treatment in a preclinical …

K Nagaoka, M Shirai, K Taniguchi, A Hosoi… - … for immunotherapy of …, 2020 - ncbi.nlm.nih.gov
Background Although immune checkpoint blockade is effective for several malignancies, a
substantial number of patients remain refractory to treatment. The future of immunotherapy …

[HTML][HTML] Cancer-specific immune prognostic signature in solid tumors and its relation to immune checkpoint therapies

S Das, K Camphausen, U Shankavaram - Cancers, 2020 - mdpi.com
To elucidate the role of immune cell infiltration as a prognostic signature in solid tumors, we
analyzed immune-function-related genes from four publicly available single-cell RNA-Seq …

[HTML][HTML] Technological advances in cancer immunity: from immunogenomics to single-cell analysis and artificial intelligence

Y Xu, GH Su, D Ma, Y Xiao, ZM Shao… - Signal Transduction and …, 2021 - nature.com
Immunotherapies play critical roles in cancer treatment. However, given that only a few
patients respond to immune checkpoint blockades and other immunotherapeutic strategies …

[HTML][HTML] Single-cell transcriptomics in cancer immunobiology: the future of precision oncology

F Valdes-Mora, K Handler, AMK Law… - Frontiers in …, 2018 - frontiersin.org
Cancer is a heterogeneous and complex disease. Tumors are formed by cancer cells and a
myriad of non-cancerous cell types that together with the extracellular matrix form the tumor …