A checklist for maximizing reproducibility of ecological niche models

X Feng, DS Park, C Walker, AT Peterson… - Nature Ecology & …, 2019 - nature.com
Reporting specific modelling methods and metadata is essential to the reproducibility of
ecological studies, yet guidelines rarely exist regarding what information should be noted …

ntbox: An r package with graphical user interface for modelling and evaluating multidimensional ecological niches

L Osorio‐Olvera, A Lira‐Noriega… - Methods in Ecology …, 2020 - Wiley Online Library
Biodiversity studies rely heavily on estimates of species' distributions often obtained through
ecological niche modelling. Numerous software packages exist that allow users to model …

Want to model a species niche? A step-by-step guideline on correlative ecological niche modelling

N Sillero, S Arenas-Castro, U Enriquez‐Urzelai… - Ecological …, 2021 - Elsevier
The use of correlative ecological niche models has highly increased in the last decade.
Despite all literature and textbooks in this field, few practical guidelines exist on the correct …

A new null model approach to quantify performance and significance for ecological niche models of species distributions

CL Bohl, JM Kass, RP Anderson - Journal of Biogeography, 2019 - Wiley Online Library
Aim Ecological niche modelling requires robust estimation of model performance and
significance, but common evaluation approaches often yield biased estimates. Null models …

Variation in niche and distribution model performance: the need for a priori assessment of key causal factors

EE Saupe, V Barve, CE Myers, J Soberón, N Barve… - Ecological …, 2012 - Elsevier
Ecological niche models and species distribution models are becoming important elements
in the toolkit of biogeographers and ecologists. Although burgeoning in use, much variation …

No silver bullets in correlative ecological niche modelling: insights from testing among many potential algorithms for niche estimation

H Qiao, J Soberón, AT Peterson - Methods in Ecology and …, 2015 - Wiley Online Library
The field of ecological niche modelling or species distribution modelling has seen enormous
activity and attention in recent years, in the light of exciting biological inferences that can be …

Constraints on interpretation of ecological niche models by limited environmental ranges on calibration areas

HL Owens, LP Campbell, LL Dornak, EE Saupe… - Ecological …, 2013 - Elsevier
Correlational models of species' ecological niches are commonly used to transfer model
rules onto other sets of conditions to evaluate species' distributional potential. As with any …

Niche estimation above and below the species level

AB Smith, W Godsoe, F Rodríguez-Sánchez… - Trends in ecology & …, 2019 - cell.com
Ecological niches reflect not only adaptation to local circumstances but also the tendency of
related lineages to share environmental tolerances. As a result, information on phylogenetic …

ENMeval 2.0: Redesigned for customizable and reproducible modeling of species' niches and distributions

JM Kass, R Muscarella, PJ Galante… - Methods in Ecology …, 2021 - Wiley Online Library
Quantitative evaluations to optimize complexity have become standard for avoiding
overfitting of ecological niche models (ENMs) that estimate species' potential geographic …

ENMeval: An R package for conducting spatially independent evaluations and estimating optimal model complexity for Maxent ecological niche models

R Muscarella, PJ Galante… - Methods in ecology …, 2014 - Wiley Online Library
Recent studies have demonstrated a need for increased rigour in building and evaluating
ecological niche models (ENM s) based on presence‐only occurrence data. Two major …