[HTML][HTML] An atlas of healthy and injured cell states and niches in the human kidney

BB Lake, R Menon, S Winfree, Q Hu, R Melo Ferreira… - Nature, 2023 - nature.com
Understanding kidney disease relies on defining the complexity of cell types and states, their
associated molecular profiles and interactions within tissue neighbourhoods. Here we …

[HTML][HTML] Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney

Y Muto, PC Wilson, N Ledru, H Wu, H Dimke… - Nature …, 2021 - nature.com
The integration of single cell transcriptome and chromatin accessibility datasets enables a
deeper understanding of cell heterogeneity. We performed single nucleus ATAC (snATAC …

Mapping the human kidney using single-cell genomics

F Schreibing, R Kramann - Nature Reviews Nephrology, 2022 - nature.com
The field of single-cell genomics and spatial technologies is rapidly evolving and has
already provided unprecedented insights into complex tissues. Major advances have been …

[PDF][PDF] Single-cell profiling reveals sex, lineage, and regional diversity in the mouse kidney

A Ransick, NO Lindström, J Liu, Q Zhu, JJ Guo… - Developmental cell, 2019 - cell.com
Chronic kidney disease affects 10% of the population with notable differences in ethnic and
sex-related susceptibility to kidney injury and disease. Kidney dysfunction leads to …

[HTML][HTML] Understanding the kidney one cell at a time

J Park, CL Liu, J Kim, K Susztak - Kidney international, 2019 - Elsevier
A revolution in cellular measurement technology is underway. Whereas prior studies have
been able to analyze only the averaged outputs from renal tissue, we now can accurately …

[HTML][HTML] Integration of spatial and single-cell transcriptomics localizes epithelial cell–immune cross-talk in kidney injury

RM Ferreira, AR Sabo, S Winfree, KS Collins… - JCI insight, 2021 - ncbi.nlm.nih.gov
Single-cell sequencing studies have characterized the transcriptomic signature of cell types
within the kidney. However, the spatial distribution of acute kidney injury (AKI) is regional …

[HTML][HTML] Spatially resolved transcriptomic analysis of acute kidney injury in a female murine model

EE Dixon, H Wu, Y Muto, PC Wilson… - Journal of the …, 2022 - journals.lww.com
Background Single-cell sequencing technologies have advanced our understanding of
kidney biology and disease, but the loss of spatial information in these datasets hinders our …

A reference tissue atlas for the human kidney

J Hansen, R Sealfon, R Menon, MT Eadon, BB Lake… - Science …, 2022 - science.org
Kidney Precision Medicine Project (KPMP) is building a spatially specified human kidney
tissue atlas in health and disease with single-cell resolution. Here, we describe the …

Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease

J Park, R Shrestha, C Qiu, A Kondo, S Huang, M Werth… - Science, 2018 - science.org
Our understanding of kidney disease pathogenesis is limited by an incomplete molecular
characterization of the cell types responsible for the organ's multiple homeostatic functions …

[HTML][HTML] Kidney single-cell atlas reveals myeloid heterogeneity in progression and regression of kidney disease

BR Conway, ED O'Sullivan, C Cairns… - Journal of the …, 2020 - journals.lww.com
Background Little is known about the roles of myeloid cell subsets in kidney injury and in the
limited ability of the organ to repair itself. Characterizing these cells based only on surface …