An exploration of mechanisms for the transformation of 8-oxoguanine to guanidinohydantoin and spiroiminodihydantoin by density functional theory

BH Munk, CJ Burrows, HB Schlegel - Journal of the American …, 2008 - ACS Publications
The potential energy surface for formation of 2-amino-5-hydroxy-7, 9-dihydropurine-6, 8-
dione (5-OH-OG), guanidinohydantoin (Gh) and spiroiminodihydantoin (Sp) from 8 …

Exploration of mechanisms for the transformation of 8-hydroxy guanine radical to FAPyG by density functional theory

BH Munk, CJ Burrows, HB Schlegel - Chemical research in …, 2007 - ACS Publications
The potential energy surface for the transformation of 8-hydroxy guanine radical to
formamidopyrimidine adducts via four pathways has been mapped out using B3LYP density …

Structural context effects in the oxidation of 8-oxo-7, 8-dihydro-2′-deoxyguanosine to hydantoin products: electrostatics, base stacking, and base pairing

AM Fleming, JG Muller, AC Dlouhy… - Journal of the American …, 2012 - ACS Publications
8-Oxo-7, 8-dihydroguanine (OG) is the most common base damage found in cells, where it
resides in many structural contexts, including the nucleotide pool, single-stranded DNA at …

Mechanistic aspects of the formation of guanidinohydantoin from spiroiminodihydantoin under acidic conditions

Y Ye, BH Munk, JG Muller, A Cogbill… - Chemical research in …, 2009 - ACS Publications
Experimentally, it was observed that the oxidized guanine lesion spiroiminodihydantoin (Sp)
contained in highly purified oligodeoxynucleotides slowly converts to guanidinohydantoin …

Characterization of 5-hydroxy-8-oxo-7, 8-dihydroguanosine in the photosensitized oxidation of 8-oxo-7, 8-dihydroguanosine and its rearrangement to …

JEB McCallum, CY Kuniyoshi… - Journal of the American …, 2004 - ACS Publications
The photosensitized oxidation of 2 ', 3 ', 5 '-tris-(O-tert-butyldimethylsilyl)-8-oxo-7, 8-
dihydroguanosine (8-oxoG) with singlet oxygen was studied by low-temperature NMR. A …

Calculation of pKa Values of Nucleobases and the Guanine Oxidation Products Guanidinohydantoin and Spiroiminodihydantoin using Density Functional Theory …

V Verdolino, R Cammi, BH Munk… - The Journal of Physical …, 2008 - ACS Publications
An efficient computational method has been identified that uses B3LYP density functional
theory, IEF-PCM solvation modeling with a modified UFF cavity, and Boltzmann weighting of …

Computational prediction of one-electron reduction potentials and acid dissociation constants for guanine oxidation intermediates and products

BT Psciuk, HB Schlegel - The Journal of Physical Chemistry B, 2013 - ACS Publications
Reduction potentials and p K a values were calculated for intermediates and products along
three major pathways for guanine oxidation using the B3LYP and CBS-QB3 levels of theory …

Formation of guanine-6-sulfonate from 6-thioguanine and singlet oxygen: A combined theoretical and experimental study

X Zou, H Zhao, Y Yu, H Su - Journal of the American Chemical …, 2013 - ACS Publications
As an end metabolism product of the widely used thiopurine drugs, 6-thioguanine (6-TG)
absorbs UVA and produces 1O2 by photosensitization. This unusual photochemical …

Spiroiminodihydantoin lesions derived from guanine oxidation: structures, energetics, and functional implications

L Jia, V Shafirovich, R Shapiro, NE Geacintov… - Biochemistry, 2005 - ACS Publications
Reactive oxygen species present in the cell generate DNA damage. One of the major
oxidation products of guanine in DNA, 8-oxo-7, 8-dihydroguanine, formed by loss of two …

Hydantoin derivative formation from oxidation of 7, 8-dihydro-8-oxo-2′-deoxyguanosine (8-oxodG) and incorporation of 14C-labeled 8-oxodG into the DNA of human …

SS Hah, HM Kim, RA Sumbad… - Bioorganic & medicinal …, 2005 - Elsevier
One-electron oxidation of 7, 8-dihydro-8-oxo-2′-deoxyguanosine (8-oxodG) yielded a
guanidinohydantoin derivative (dGh) and a spiroiminodihydantoin derivative (dSp), both …