Massively parallel techniques for cataloguing the regulome of the human brain

KG Townsley, KJ Brennand, LM Huckins - Nature neuroscience, 2020 - nature.com
Complex brain disorders are highly heritable and arise from a complex polygenic risk
architecture. Many disease-associated loci are found in non-coding regions that house …

Modeling the complex genetic architectures of brain disease

MB Fernando, T Ahfeldt, KJ Brennand - Nature genetics, 2020 - nature.com
The genetic architecture of each individual comprises common and rare variants that, acting
alone and in combination, confer risk of disease. The cell-type-specific and/or context …

CRISPR-based functional genomics for neurological disease

M Kampmann - Nature Reviews Neurology, 2020 - nature.com
Neurodegenerative, neurodevelopmental and neuropsychiatric disorders are among the
greatest public health challenges, as many lack disease-modifying treatments. A major …

Evaluating synthetic activation and repression of neuropsychiatric-related genes in hiPSC-derived NPCs, neurons, and astrocytes

SM Ho, BJ Hartley, E Flaherty, P Rajarajan, R Abdelaal… - Stem cell reports, 2017 - cell.com
Modulation of transcription, either synthetic activation or repression, via dCas9-fusion
proteins is a relatively new methodology with the potential to facilitate high-throughput up-or …

CRISPR interference-based platform for multimodal genetic screens in human iPSC-derived neurons

R Tian, MA Gachechiladze, CH Ludwig, MT Laurie… - Neuron, 2019 - cell.com
CRISPR/Cas9-based functional genomics have transformed our ability to elucidate
mammalian cell biology. However, most previous CRISPR-based screens were conducted …

Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation

J Jerber, DD Seaton, ASE Cuomo, N Kumasaka… - Nature …, 2021 - nature.com
Studying the function of common genetic variants in primary human tissues and during
development is challenging. To address this, we use an efficient multiplexing strategy to …

Application of CRISPR/Cas9 to the study of brain development and neuropsychiatric disease

SK Powell, J Gregory, S Akbarian… - Molecular and Cellular …, 2017 - Elsevier
CRISPR/Cas9 technology has transformed our ability to manipulate the genome and
epigenome, from efficient genomic editing to targeted localization of effectors to specific loci …

[HTML][HTML] Genome-scale CRISPR screens identify human pluripotency-specific genes

RJ Ihry, MR Salick, DJ Ho, M Sondey, S Kommineni… - Cell reports, 2019 - cell.com
Human pluripotent stem cells (hPSCs) generate a variety of disease-relevant cells that can
be used to improve the translation of preclinical research. Despite the potential of hPSCs …

A CRISPRi/a platform in human iPSC-derived microglia uncovers regulators of disease states

NM Dräger, SM Sattler, CTL Huang, OM Teter… - Nature …, 2022 - nature.com
Microglia are emerging as key drivers of neurological diseases. However, we lack a
systematic understanding of the underlying mechanisms. Here, we present a screening …

Human pluripotent stem cell–derived models and drug screening in CNS precision medicine

MC Silva, SJ Haggarty - Annals of the New York Academy of …, 2020 - Wiley Online Library
Abstract Development of effective therapeutics for neurological disorders has historically
been challenging partly because of lack of accurate model systems in which to investigate …