Metagenomics of wastewater influent from wastewater treatment facilities across Ontario in the era of emerging SARS-CoV-2 variants of concern

OU Lawal, L Zhang, VR Parreira… - Microbiology …, 2022 - Am Soc Microbiol
We report metagenomic sequencing analyses of severe acute respiratory syndrome
coronavirus 2 (SARS-CoV-2) RNA in composite wastewater influent from 10 regions in …

Metatranscriptomic analysis reveals SARS-CoV-2 mutations in wastewater of the Frankfurt metropolitan area in southern Germany

S Agrawal, L Orschler, S Lackner - Microbiology Resource …, 2021 - Am Soc Microbiol
We report a sequencing analysis of severe acute respiratory syndrome coronavirus 2 (SARS-
CoV-2) RNA in wastewater samples collected in the Frankfurt metropolitan area of Germany …

Quantitative reverse transcription pcr surveillance of SARS-CoV-2 variants of concern in wastewater of two counties in Texas, United States

LM Langan, M O'Brien, LM Lovin, KR Scarlett… - ACS Es&t …, 2022 - ACS Publications
After its emergence in late November/December 2019, the severe acute respiratory
syndrome coronavirus 2 virus (SARS-CoV-2) rapidly spread globally. Recognizing that this …

[HTML][HTML] Estimating relative abundance of 2 SARS-CoV-2 variants through wastewater surveillance at 2 large metropolitan sites, United States

TY Alexander, B Hughes, MK Wolfe… - Emerging Infectious …, 2022 - ncbi.nlm.nih.gov
Monitoring severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of
concern (VOCs) is critical for public health management of coronavirus disease. Sequencing …

Quantification and Differentiation of SARS-CoV-2 Variants in Wastewater for Surveillance

T Kumblathan, Y Liu, X Pang, SE Hrudey… - Environment & …, 2023 - ACS Publications
Wastewater surveillance plays an important role in the monitoring of infections of SARS-CoV-
2 at the community level. We report here the determination of SARS-CoV-2 and …

Genome sequencing of sewage detects regionally prevalent SARS-CoV-2 variants

A Crits-Christoph, RS Kantor, MR Olm, ON Whitney… - MBio, 2021 - Am Soc Microbiol
Viral genome sequencing has guided our understanding of the spread and extent of genetic
diversity of SARS-CoV-2 during the COVID-19 pandemic. SARS-CoV-2 viral genomes are …

Chronic shedding of a SARS-CoV-2 Alpha variant in wastewater

MJ Conway, H Yang, LA Revord, MP Novay, RJ Lee… - BMC genomics, 2024 - Springer
Abstract Background Central Michigan University (CMU) participated in a state-wide SARS-
CoV-2 wastewater monitoring program since 2021. Wastewater samples were collected …

Detection of mutations associated with variants of concern via high throughput sequencing of SARS-CoV-2 isolated from NYC wastewater

DS Smyth, M Trujillo, K Cheung, A Gao, I Hoxie… - medRxiv, 2021 - medrxiv.org
Monitoring SARS-CoV-2 genetic diversity is strongly indicated because diversifying
selection may lead to the emergence of novel variants resistant to naturally acquired or …

Surveillance for SARS‐CoV‐2 and its variants in wastewater of tertiary care hospitals correlates with increasing case burden and outbreaks

N Acosta, MA Bautista, BJ Waddell, K Du… - Journal of Medical …, 2023 - Wiley Online Library
Abstract Wastewater‐based SARS‐CoV‐2 surveillance enables unbiased and
comprehensive monitoring of defined sewersheds. We performed real‐time monitoring of …

[HTML][HTML] Detection of SARS-CoV-2 B. 1.351 (Beta) variant through wastewater surveillance before case detection in a community, Oregon, USA

M Sutton, TS Radniecki, D Kaya, D Alegre… - Emerging Infectious …, 2022 - ncbi.nlm.nih.gov
Genomic surveillance has emerged as a critical monitoring tool during the SARS-CoV-2
pandemic. Wastewater surveillance has the potential to identify and track SARS-CoV-2 …