An integrative genomics approach for associating genome-wide association studies information with localized and metastatic prostate cancer phenotypes

C Hicks, R Ramani, O Sartor, R Bhalla… - Biomarker …, 2017 - journals.sagepub.com
High-throughput genotyping has enabled discovery of genetic variants associated with an
increased risk of developing prostate cancer using genome-wide association studies …

Comprehensive assessment and network analysis of the emerging genetic susceptibility landscape of prostate cancer

C Hicks, L Miele, T Koganti… - Cancer …, 2013 - journals.sagepub.com
Background Recent advances in high-throughput genotyping have made possible
identification of genetic variants associated with increased risk of developing prostate …

Integrative genomic analysis for the discovery of biomarkers in prostate cancer

C Hicks, T Koganti, S Giri, M Tekere… - Biomarker …, 2014 - journals.sagepub.com
Genome-wide association studies (GWAS) have achieved great success in identifying single
nucleotide polymorphisms (SNPs, herein called genetic variants) and genes associated with …

Pathway analysis of genes identified through post-GWAS to underpin prostate cancer aetiology

S Farashi, T Kryza, J Batra - Genes, 2020 - mdpi.com
Understanding the functional role of risk regions identified by genome-wide association
studies (GWAS) has made considerable recent progress and is referred to as the post …

GWAS meets microarray: are the results of genome-wide association studies and gene-expression profiling consistent? Prostate cancer as an example

IP Gorlov, GE Gallick, OY Gorlova, C Amos… - PLoS …, 2009 - journals.plos.org
Background Genome-wide association studies (GWASs) and global profiling of gene
expression (microarrays) are two major technological breakthroughs that allow hypothesis …

Integrative pathway analysis of genome-wide association studies and gene expression data in prostate cancer

P Jia, Y Liu, Z Zhao - BMC systems biology, 2012 - Springer
Background Pathway analysis of large-scale omics data assists us with the examination of
the cumulative effects of multiple functionally related genes, which are difficult to detect …

Integrating germline and somatic variation information using genomic data for the discovery of biomarkers in prostate cancer

TKK Mamidi, J Wu, C Hicks - BMC cancer, 2019 - Springer
Abstract Background Prostate cancer (PCa) is the most common diagnosed malignancy and
the second leading cause of cancer-related deaths among men in the United States. High …

A review of prostate cancer genome-wide association studies (GWAS)

S Benafif, Z Kote-Jarai, RA Eeles - Cancer Epidemiology, Biomarkers & …, 2018 - AACR
Prostate cancer is the most common cancer in men in Europe and the United States. The
genetic heritability of prostate cancer is contributed to by both rarely occurring genetic …

Elucidation of the Genomic‐Epigenomic Interaction Landscape of Aggressive Prostate Cancer

TK Kumar Mamidi, J Wu, C Hicks - BioMed research …, 2021 - Wiley Online Library
Background. Majority of prostate cancer (PCa) deaths are attributed to localized high‐grade
aggressive tumours which progress rapidly to metastatic disease. A critical unmet need in …

Post-GWAS in prostate cancer: from genetic association to biological contribution

S Farashi, T Kryza, J Clements, J Batra - Nature Reviews Cancer, 2019 - nature.com
Genome-wide association studies (GWAS) have been successful in deciphering the genetic
component of predisposition to many human complex diseases including prostate cancer …