LncRNA FLAIL affects alternative splicing and represses flowering in Arabidopsis

Y Jin, M Ivanov, AN Dittrich, ADL Nelson… - The EMBO …, 2023 - embopress.org
How the noncoding genome affects cellular functions is a key biological question. A
particular challenge is to distinguish the effects of noncoding DNA elements from long …

[HTML][HTML] Long noncoding RNA modulates alternative splicing regulators in Arabidopsis

F Bardou, F Ariel, CG Simpson, N Romero-Barrios… - Developmental cell, 2014 - cell.com
Alternative splicing (AS) of pre-mRNA represents a major mechanism underlying increased
transcriptome and proteome complexity. Here, we show that the nuclear speckle RNA …

The Arabidopsis lncRNA ASCO modulates the transcriptome through interaction with splicing factors

R Rigo, J Bazin, N Romero‐Barrios, M Moison… - EMBO …, 2020 - embopress.org
Alternative splicing (AS) is a major source of transcriptome diversity. Long noncoding RNA s
(lnc RNA s) have emerged as regulators of AS through different molecular mechanisms. In …

[HTML][HTML] RNA Splicing of FLC Modulates the Transition to Flowering

HD Qi, Y Lin, QP Ren, YY Wang, F Xiong… - Frontiers in plant …, 2019 - frontiersin.org
Flowering is a critical stage of plant development and is closely correlated with seed
production and crop yield. Flowering transition is regulated by complex genetic networks in …

KHZ1 and KHZ2, novel members of the autonomous pathway, repress the splicing efficiency of FLC pre-mRNA in Arabidopsis

Z Yan, H Shi, Y Liu, M Jing, Y Han - Journal of Experimental …, 2020 - academic.oup.com
As one of the most important events during the life cycle of flowering plants, the floral
transition is of crucial importance for plant propagation and requires the precise coordination …

Phase separation of HRLP regulates flowering time in Arabidopsis

Y Zhang, S Fan, C Hua, ZWN Teo, JX Kiang, L Shen… - Science …, 2022 - science.org
RNA binding proteins mediate posttranscriptional RNA metabolism and play regulatory roles
in many developmental processes in eukaryotes. Despite their known effects on the floral …

Phenotypic evolution through variation in splicing of the noncoding RNA COOLAIR

P Li, Z Tao, C Dean - Genes & development, 2015 - genesdev.cshlp.org
The extent to which natural polymorphisms in noncoding sequences have functional
consequences is still unknown. A large proportion of the natural variation in flowering in …

[HTML][HTML] Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA

X Zhao, J Li, B Lian, H Gu, Y Li, Y Qi - Nature communications, 2018 - nature.com
Long non-coding RNAs (lncRNAs) have emerged as important regulators of gene
expression and plant development. Here, we identified 6,510 lncRNAs in Arabidopsis under …

[HTML][HTML] Exogenously overexpressed intronic long noncoding RNAs activate host gene expression by affecting histone modification in Arabidopsis

ZW Liu, N Zhao, YN Su, SS Chen, XJ He - Scientific Reports, 2020 - nature.com
Involvement of long non-coding RNAs (lncRNAs) in the regulation of gene expression in cis
has been well studied in eukaryotes but relatively little is known whether and how lncRNAs …

[HTML][HTML] The Arabidopsis RNA-binding protein FCA requires a lysine-specific demethylase 1 homolog to downregulate FLC

F Liu, V Quesada, P Crevillén, I Bäurle, S Swiezewski… - Molecular cell, 2007 - cell.com
A repressor of the transition to flowering in Arabidopsis is the MADS box protein
FLOWERING LOCUS C (FLC). FCA, an RNA-binding protein, and FY, a homolog of the …