[HTML][HTML] Cross talk between the upstream exon-intron junction and Prp2 facilitates splicing of non-consensus introns
Splicing of mRNA precursors is essential in the regulation of gene expression. U2AF65
recognizes the poly-pyrimidine tract and helps in the recognition of the branch point …
recognizes the poly-pyrimidine tract and helps in the recognition of the branch point …
A conditional role of U2AF in splicing of introns with unconventional polypyrimidine tracts
V Sridharan, R Singh - Molecular and cellular biology, 2007 - Taylor & Francis
Recognition of polypyrimidine (Py) tracts typically present between the branch point and the
3′ splice site by the large subunit of the essential splicing factor U2AF is a key early step in …
3′ splice site by the large subunit of the essential splicing factor U2AF is a key early step in …
[HTML][HTML] Cwf16p associating with the nineteen complex ensures ordered exon joining in constitutive pre-mRNA splicing in fission yeast
N Sasaki-Haraguchi, T Ikuyama, S Yoshii… - PLoS …, 2015 - journals.plos.org
Exons are ligated in an ordered manner without the skipping of exons in the constitutive
splicing of pre-mRNAs with multiple introns. To identify factors ensuring ordered exon …
splicing of pre-mRNAs with multiple introns. To identify factors ensuring ordered exon …
[HTML][HTML] Genome-wide analysis of pre-mRNA splicing: intron features govern the requirement for the second-step factor, Prp17 in Saccharomyces cerevisiae and …
AK Sapra, Y Arava, P Khandelia… - Journal of Biological …, 2004 - ASBMB
Removal of pre-mRNA introns is an essential step in eukaryotic genome interpretation. The
spliceosome, a ribonucleoprotein performs this critical function; however, precise roles for …
spliceosome, a ribonucleoprotein performs this critical function; however, precise roles for …
Long-read sequencing of nascent RNA reveals coupling among RNA processing events
L Herzel, K Straube, KM Neugebauer - Genome research, 2018 - genome.cshlp.org
Pre-mRNA splicing is accomplished by the spliceosome, a megadalton complex that
assembles de novo on each intron. Because spliceosome assembly and catalysis occur …
assembles de novo on each intron. Because spliceosome assembly and catalysis occur …
[HTML][HTML] Invariant U2 snRNA nucleotides form a stem loop to recognize the intron early in splicing
R Perriman, M Ares - Molecular cell, 2010 - cell.com
U2 snRNA-intron branchpoint pairing is a critical step in pre-mRNA recognition by the
splicing apparatus, but the mechanism by which these two RNAs engage each other is …
splicing apparatus, but the mechanism by which these two RNAs engage each other is …
[HTML][HTML] The fission yeast pre-mRNA-processing factor 18 (prp18+) has intron-specific splicing functions with links to G1-S cell cycle progression
The fission yeast genome, which contains numerous short introns, is an apt model for
studies on fungal splicing mechanisms and splicing by intron definition. Here we perform a …
studies on fungal splicing mechanisms and splicing by intron definition. Here we perform a …
[HTML][HTML] Splicing of nascent RNA coincides with intron exit from RNA polymerase II
Protein-coding genes in eukaryotes are transcribed by RNA polymerase II (Pol II) and
introns are removed from pre-mRNA by the spliceosome. Understanding the time lag …
introns are removed from pre-mRNA by the spliceosome. Understanding the time lag …
Splicing of branchpoint-distant exons is promoted by Cactin, Tls1 and the ubiquitin-fold-activated Sde2
AT Anil, K Choudhary, R Pandian, P Gupta… - Nucleic Acids …, 2022 - academic.oup.com
Intron diversity facilitates regulated gene expression and alternative splicing. Spliceosomes
excise introns after recognizing their splicing signals: the 5′-splice site (5′ ss) …
excise introns after recognizing their splicing signals: the 5′-splice site (5′ ss) …
[HTML][HTML] Uncoupling yeast intron recognition from transcription with recursive splicing
PJ Lopez, B Séraphin - EMBO reports, 2000 - embopress.org
Pre‐mRNA splicing has to be coordinated with other processes occurring in the nucleus
including transcription, mRNA 3′ end formation and mRNA export. To analyze the …
including transcription, mRNA 3′ end formation and mRNA export. To analyze the …