[HTML][HTML] Mapping clustered mutations in cancer reveals APOBEC3 mutagenesis of ecDNA
Clustered somatic mutations are common in cancer genomes and previous analyses reveal
several types of clustered single-base substitutions, which include doublet-and multi-base …
several types of clustered single-base substitutions, which include doublet-and multi-base …
DNA mismatch repair promotes APOBEC3-mediated diffuse hypermutation in human cancers
D Mas-Ponte, F Supek - Nature genetics, 2020 - nature.com
Certain mutagens, including the APOBEC3 (A3) cytosine deaminase enzymes, can create
multiple genetic changes in a single event. Activity of A3s results in striking 'mutation …
multiple genetic changes in a single event. Activity of A3s results in striking 'mutation …
[HTML][HTML] Mechanisms of APOBEC3 mutagenesis in human cancer cells
M Petljak, A Dananberg, K Chu, EN Bergstrom… - Nature, 2022 - nature.com
The APOBEC3 family of cytosine deaminases has been implicated in some of the most
prevalent mutational signatures in cancer,–. However, a causal link between endogenous …
prevalent mutational signatures in cancer,–. However, a causal link between endogenous …
An APOBEC3A hypermutation signature is distinguishable from the signature of background mutagenesis by APOBEC3B in human cancers
Elucidation of mutagenic processes shaping cancer genomes is a fundamental problem
whose solution promises insights into new treatment, diagnostic and prevention strategies …
whose solution promises insights into new treatment, diagnostic and prevention strategies …
Association of a germline copy number polymorphism of APOBEC3A and APOBEC3B with burden of putative APOBEC-dependent mutations in breast cancer
The somatic mutations in a cancer genome are the aggregate outcome of one or more
mutational processes operative through the lifetime of the individual with cancer,,. Each …
mutational processes operative through the lifetime of the individual with cancer,,. Each …
Signatures of mutational processes in human cancer
All cancers are caused by somatic mutations; however, understanding of the biological
processes generating these mutations is limited. The catalogue of somatic mutations from a …
processes generating these mutations is limited. The catalogue of somatic mutations from a …
Passenger hotspot mutations in cancer driven by APOBEC3A and mesoscale genomic features
INTRODUCTION Extensive tumor sequencing efforts have transformed the way in which
cancer driver genes are identified. Appropriate statistical modeling is crucial for …
cancer driver genes are identified. Appropriate statistical modeling is crucial for …
Evidence for APOBEC3B mutagenesis in multiple human cancers
Thousands of somatic mutations accrue in most human cancers, and their causes are
largely unknown. We recently showed that the DNA cytidine deaminase APOBEC3B …
largely unknown. We recently showed that the DNA cytidine deaminase APOBEC3B …
[HTML][HTML] Prospectively defined patterns of APOBEC3A mutagenesis are prevalent in human cancers
Mutational signatures defined by single base substitution (SBS) patterns in cancer have
elucidated potential mutagenic processes that contribute to malignancy. Two prevalent …
elucidated potential mutagenic processes that contribute to malignancy. Two prevalent …
Addressing the benefits of inhibiting APOBEC3-dependent mutagenesis in cancer
Mutational signatures associated with apolipoprotein B mRNA-editing enzyme catalytic
polypeptide-like (APOBEC) 3 cytosine deaminase activity have been found in over half of …
polypeptide-like (APOBEC) 3 cytosine deaminase activity have been found in over half of …