Molecular dynamics simulations and novel drug discovery

X Liu, D Shi, S Zhou, H Liu, H Liu… - Expert opinion on drug …, 2018 - Taylor & Francis
Introduction: Molecular dynamics (MD) simulations can provide not only plentiful dynamical
structural information on biomacromolecules but also a wealth of energetic information …

Applications of molecular dynamics simulations in drug discovery

S AlRawashdeh, KH Barakat - Computational Drug Discovery and Design, 2023 - Springer
In the current drug development process, molecular dynamics (MD) simulations have proven
to be very useful. This chapter provides an overview of the current applications of MD …

Molecular dynamics simulation in drug discovery: opportunities and challenges

R Shukla, T Tripathi - Innovations and implementations of computer aided …, 2021 - Springer
Drug discovery is the process used to discover new candidate medications. In the past, most
drugs were discovered by identification of active-ingredients or by serendipity. Modern drug …

Application of molecular dynamics simulation in biomedicine

X Wu, LY Xu, EM Li, G Dong - Chemical biology & drug design, 2022 - Wiley Online Library
Molecular dynamics (MD) simulation has been widely used in the field of biomedicine to
study the conformational transition of proteins caused by mutation or ligand …

Current tools and methods in molecular dynamics (MD) simulations for drug design

M Hernández-Rodríguez… - Current medicinal …, 2016 - ingentaconnect.com
Molecular Dynamics (MD) simulations is a computational method that employs Newton's
laws to evaluate the motions of water, ions, small molecules, and macromolecules or more …

Mechanistic understanding from molecular dynamics simulation in pharmaceutical research 1: drug delivery

A Bunker, T Róg - Frontiers in Molecular Biosciences, 2020 - frontiersin.org
In this review, we outline the growing role that molecular dynamics simulation is able to play
as a design tool in drug delivery. We cover both the pharmaceutical and computational …

Molecular dynamics-driven drug discovery: leaping forward with confidence

A Ganesan, ML Coote, K Barakat - Drug discovery today, 2017 - Elsevier
Highlights•Currently, developing a market-approved drug costs a staggering $2.6 billion.•In
silico methods have become an important strategy for narrowing down on promising lead …

Use of molecular dynamics simulations in structure-based drug discovery

I Bera, PV Payghan - Current pharmaceutical design, 2019 - ingentaconnect.com
Background: Traditional drug discovery is a lengthy process which involves a huge amount
of resources. Modern-day drug discovers various multidisciplinary approaches amongst …

Steered molecular dynamics simulation in rational drug design

PC Do, EH Lee, L Le - Journal of Chemical Information and …, 2018 - ACS Publications
Conventional de novo drug design is time consuming, laborious, and resource intensive. In
recent years, emerging in silico approaches have been proven to be critical to accelerate the …

Molecular dynamics: new frontier in personalized medicine

P Sneha, CGP Doss - Advances in protein chemistry and structural biology, 2016 - Elsevier
The field of drug discovery has witnessed infinite development over the last decade with the
demand for discovery of novel efficient lead compounds. Although the development of novel …