5-Formylcytosine can be a stable DNA modification in mammals
M Bachman, S Uribe-Lewis, X Yang… - Nature chemical …, 2015 - nature.com
Formylcytosine (5fC) is a rare base found in mammalian DNA and thought to be involved in
active DNA demethylation. Here, we show that developmental dynamics of 5fC levels in …
active DNA demethylation. Here, we show that developmental dynamics of 5fC levels in …
5-Formylcytosine alters the structure of the DNA double helix
EA Raiber, P Murat, DY Chirgadze, D Beraldi… - Nature structural & …, 2015 - nature.com
Abstract The modified base 5-formylcytosine (5fC) was recently identified in mammalian
DNA and might be considered to be the'seventh'base of the genome. This nucleotide has …
DNA and might be considered to be the'seventh'base of the genome. This nucleotide has …
Potential functional roles of DNA demethylation intermediates
DNA methylation in the form of 5-methylcytosine (5mC) is a key epigenetic regulator in
mammals, and the dynamic balance between methylation and demethylation impacts …
mammals, and the dynamic balance between methylation and demethylation impacts …
[HTML][HTML] 5-Hydroxymethylcytosine: a stable or transient DNA modification?
MA Hahn, PE Szabó, GP Pfeifer - Genomics, 2014 - Elsevier
Abstract The DNA base 5-hydroxymethylcytosine (5hmC) is produced by enzymatic
oxidation of 5-methylcytosine (5mC) by 5mC oxidases (the Tet proteins). Since 5hmC is …
oxidation of 5-methylcytosine (5mC) by 5mC oxidases (the Tet proteins). Since 5hmC is …
Quantitative sequencing of 5-formylcytosine in DNA at single-base resolution
Recently, the cytosine modifications 5-hydroxymethylcytosine (5hmC) and 5-formylcytosine
(5fC) were found to exist in the genomic deoxyribonucleic acid (DNA) of a wide range of …
(5fC) were found to exist in the genomic deoxyribonucleic acid (DNA) of a wide range of …
Bisulfite-free, base-resolution analysis of 5-formylcytosine at the genome scale
Active DNA demethylation in mammals involves oxidation of 5-methylcytosine (5mC) to 5-
hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC) and 5-carboxylcytosine (5caC) …
hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC) and 5-carboxylcytosine (5caC) …
Age‐dependent levels of 5‐methyl‐, 5‐hydroxymethyl‐, and 5‐formylcytosine in human and mouse brain tissues
M Wagner, J Steinbacher, TFJ Kraus… - Angewandte Chemie …, 2015 - Wiley Online Library
The absolute levels of 5‐hydroxymethylcytosine (hmC) and 5‐methylcytosine (mC) in
human brain tissues at various ages were determined. Additionally, absolute levels of 5 …
human brain tissues at various ages were determined. Additionally, absolute levels of 5 …
5-Formylcytosine to cytosine conversion by C–C bond cleavage in vivo
K Iwan, R Rahimoff, A Kirchner, F Spada… - Nature chemical …, 2018 - nature.com
Tet enzymes oxidize 5-methyl-deoxycytidine (mdC) to 5-hydroxymethyl-dC (hmdC), 5-formyl-
dC (fdC) and 5-carboxy-dC (cadC) in DNA. It was proposed that fdC and cadC deformylate …
dC (fdC) and 5-carboxy-dC (cadC) in DNA. It was proposed that fdC and cadC deformylate …
[HTML][HTML] Genome-wide profiling of 5-formylcytosine reveals its roles in epigenetic priming
Summary TET proteins oxidize 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC),
5-formylcytosine (5fC), and 5-carboxylcytosine (5caC). 5fC and 5caC are excised by …
5-formylcytosine (5fC), and 5-carboxylcytosine (5caC). 5fC and 5caC are excised by …
Divergent mechanisms for enzymatic excision of 5-formylcytosine and 5-carboxylcytosine from DNA
A Maiti, AZ Michelson, CJ Armwood… - Journal of the …, 2013 - ACS Publications
5-Methylcytosine (mC) is an epigenetic mark that impacts transcription, development, and
genome stability, and aberrant DNA methylation contributes to aging and cancer. Active …
genome stability, and aberrant DNA methylation contributes to aging and cancer. Active …