Zymomonas mobilis ZM4 has recently been used for a variety of biotechnological purposes.
To rationally enhance its metabolic performance, a reliable genome-scale metabolic …

Background Zymomonas mobilis ZM4 is a Gram-negative bacterium that can efficiently
produce ethanol from various carbon substrates, including glucose, fructose, and sucrose …

High-quality genome-scale metabolic models (GEMs) could play critical roles on rational
design of microbial cell factories in the classical Design-Build-Test-Learn cycle of synthetic …

Zymomonas mobilis is an ethanologenic bacterium and is known to be an example
microorganism with energy-uncoupled growth. A genome-scale metabolic model could be …

Genome-scale metabolic models have been utilized extensively in the study and
engineering of the organisms they describe. Here we present the analysis of a published …

Background The need for discovery of alternative, renewable, environmentally friendly
energy sources and the development of cost-efficient," clean" methods for their conversion …

Pseudomonas stutzeri A1501 is a non-fluorescent denitrifying bacteria that belongs to the
gram-negative bacterial group. As a prominent strain in the fields of agriculture and …

Pseudomonas stutzeri A1501 is an endophytic bacterium capable of nitrogen fixation. This
strain has been isolated from the rice rhizosphere and provides the plant with fixed nitrogen …

Mathematical modeling of metabolism is essential for rational metabolic engineering. The
present work focuses on several types of modeling approach to quantitative understanding …

Genome-scale metabolic models (GSMMs) constitute a platform that combines genome
sequences and detailed biochemical information to quantify microbial physiology at the …