[HTML][HTML] Artificial intelligence–enabled virtual screening of ultra-large chemical libraries with deep docking
With the recent explosion of chemical libraries beyond a billion molecules, more efficient
virtual screening approaches are needed. The Deep Docking (DD) platform enables up to …
virtual screening approaches are needed. The Deep Docking (DD) platform enables up to …
The impact of supervised learning methods in ultralarge high-throughput docking
CN Cavasotto, JI Di Filippo - Journal of Chemical Information and …, 2023 - ACS Publications
Structure-based virtual screening methods are, nowadays, one of the key pillars of
computational drug discovery. In recent years, a series of studies have reported docking …
computational drug discovery. In recent years, a series of studies have reported docking …
Streamlining large chemical library docking with artificial intelligence: the PyRMD2Dock approach
M Roggia, B Natale, G Amendola… - Journal of Chemical …, 2023 - ACS Publications
The present contribution introduces a novel computational protocol called PyRMD2Dock,
which combines the Ligand-Based Virtual Screening (LBVS) tool PyRMD with the popular …
which combines the Ligand-Based Virtual Screening (LBVS) tool PyRMD with the popular …
Deep docking: a deep learning platform for augmentation of structure based drug discovery
Drug discovery is a rigorous process that requires billion dollars of investments and decades
of research to bring a molecule “from bench to a bedside”. While virtual docking can …
of research to bring a molecule “from bench to a bedside”. While virtual docking can …
[HTML][HTML] Accelerating high-throughput virtual screening through molecular pool-based active learning
Structure-based virtual screening is an important tool in early stage drug discovery that
scores the interactions between a target protein and candidate ligands. As virtual libraries …
scores the interactions between a target protein and candidate ligands. As virtual libraries …
Efficient exploration of chemical space with docking and deep learning
With the advent of make-on-demand commercial libraries, the number of purchasable
compounds available for virtual screening and assay has grown explosively in recent years …
compounds available for virtual screening and assay has grown explosively in recent years …
Ligand docking and structure-based virtual screening in drug discovery
CN Cavasotto, AJ W Orry - Current topics in medicinal chemistry, 2007 - ingentaconnect.com
Ligand-docking-based methods are starting to play a critical role in lead discovery and
optimization, thus resulting in new 'drug-candidates'. They offer the possibility to go beyond …
optimization, thus resulting in new 'drug-candidates'. They offer the possibility to go beyond …
[HTML][HTML] Charting a path to success in virtual screening
S Forli - Molecules, 2015 - mdpi.com
Docking is commonly applied to drug design efforts, especially high-throughput virtual
screenings of small molecules, to identify new compounds that bind to a given target …
screenings of small molecules, to identify new compounds that bind to a given target …
Uni-Dock: GPU-accelerated docking enables ultralarge virtual screening
Molecular docking, a structure-based virtual screening method, is a reliable tool to enrich
potential bioactive molecules from molecular databases. With the rapid expansion of …
potential bioactive molecules from molecular databases. With the rapid expansion of …
[HTML][HTML] DOVIS: an implementation for high-throughput virtual screening using AutoDock
Background Molecular-docking-based virtual screening is an important tool in drug
discovery that is used to significantly reduce the number of possible chemical compounds to …
discovery that is used to significantly reduce the number of possible chemical compounds to …
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