[HTML][HTML] Beyond co-expression: pathway discovery for plant pharmaceuticals

SH Swamidatta, BR Lichman - Current Opinion in Biotechnology, 2024 - Elsevier
Highlights•Plant natural products are a source of established and novel pharmaceuticals.•To
access the full diversity requires understanding of biosynthetic origins.•Co-expression is a …

[HTML][HTML] Harnessing plant metabolic diversity

C Owen, NJ Patron, A Huang, A Osbourn - Current opinion in chemical …, 2017 - Elsevier
Highlights•Transcriptomics is accelerating pathway discovery in diverse plant
species.•Genome mining algorithms for plant biosynthetic gene clusters have been …

Leveraging synthetic biology and metabolic engineering to overcome obstacles in plant pathway elucidation

BD Kwan, B Seligmann, TD Nguyen, J Franke… - Current opinion in plant …, 2023 - Elsevier
Major hurdles in plant biosynthetic pathway elucidation and engineering include the need
for rapid testing of enzyme candidates and the lack of complex substrates that are often not …

Cutting-edge plant natural product pathway elucidation

J Han, EP Miller, S Li - Current Opinion in Biotechnology, 2024 - Elsevier
Highlights•Challenges in pathway discovery of plant natural products (PNPs).•Multiomics-
guided pathway prediction strategies and tools.•Biochemical characterization of putative …

[HTML][HTML] Identifying missing biosynthesis enzymes of plant natural products

TD de Bernonville, N Papon, M Clastre… - Trends in …, 2020 - cell.com
Elucidating plant-specialized biosynthetic pathways has always constituted a laborious task,
notably for natural products with high pharmaceutical values. Here, we discuss emerging …

[HTML][HTML] Integrative omics approaches for biosynthetic pathway discovery in plants

KS Singh, JJJ van der Hooft, SCM van Wees… - Natural Product …, 2022 - pubs.rsc.org
Covering: up to 2022 With the emergence of large amounts of omics data, computational
approaches for the identification of plant natural product biosynthetic pathways and their …

Secondary metabolite pathways in medicinal plants: approaches in reconstruction and analysis

S Pathak, AV Agarwal, P Agarwal… - Molecular Approaches in …, 2019 - Springer
Medicinal plants are the abundant source of varied secondary metabolites with important
therapeutic properties. These plants and their extracts have been the basis of several …

[HTML][HTML] Using gene expression to study specialized metabolism—a practical guide

R Delli-Ponti, D Shivhare, M Mutwil - Frontiers in Plant Science, 2021 - frontiersin.org
Plants produce a vast array of chemical compounds that we use as medicines and flavors,
but these compounds' biosynthetic pathways are still poorly understood. This paucity …

A revolution in plant metabolism: genome-enabled pathway discovery

J Kim, CR Buell - Plant Physiology, 2015 - academic.oup.com
Genome-enabled discoveries are the hallmark of 21st century biology, including major
discoveries in the biosynthesis and regulation of plant metabolic pathways. Access to next …

Natural compounds derived from plants can be categorized into three different groups according to their final use in developing a drug

KM Oksman-Caldentey, D Inzé - Trends in Plant Science, 2004 - infona.pl
Plants synthesize an extensive array of secondary metabolites, often with highly complex
structures. Currently, most pharmaceutically important secondary metabolites are isolated …