Quantification of transcription noise's impact on cell fate commitment with digital resolutions
F Jiao, M Tang - Bioinformatics, 2022 - academic.oup.com
Motivation Gene transcription is a random and noisy process. Tremendous efforts in single-
cell studies have been mapping transcription noises to phenotypic variabilities between …
cell studies have been mapping transcription noises to phenotypic variabilities between …
[HTML][HTML] Buffering and amplifying transcriptional noise during cell fate specification
EA Urban, RJ Johnston Jr - Frontiers in genetics, 2018 - frontiersin.org
The molecular processes that drive gene transcription are inherently noisy. This noise often
manifests in the form of transcriptional bursts, producing fluctuations in gene activity over …
manifests in the form of transcriptional bursts, producing fluctuations in gene activity over …
[HTML][HTML] Modeling-based investigation of the effect of noise in cellular systems
Noise is pervasive in cellular biology and inevitably affects the dynamics of cellular
processes. Biological systems have developed regulatory mechanisms to ensure …
processes. Biological systems have developed regulatory mechanisms to ensure …
Phenotypic switching in gene regulatory networks
Noise in gene expression can lead to reversible phenotypic switching. Several experimental
studies have shown that the abundance distributions of proteins in a population of isogenic …
studies have shown that the abundance distributions of proteins in a population of isogenic …
Post‐transcriptional noise control
MMK Hansen, LS Weinberger - BioEssays, 2019 - Wiley Online Library
Recent evidence indicates that transcriptional bursts are intrinsically amplified by
messenger RNA cytoplasmic processing to generate large stochastic fluctuations in protein …
messenger RNA cytoplasmic processing to generate large stochastic fluctuations in protein …
Silent transcription intervals and translational bursting lead to diverse phenotypic switching
X Yang, S Luo, Z Zhang, Z Wang, T Zhou… - Physical Chemistry …, 2022 - pubs.rsc.org
Gene-expression bimodality, as a potential mechanism generating phenotypic cell diversity,
can enhance the survival of cells in a fluctuating environment. Previous studies have shown …
can enhance the survival of cells in a fluctuating environment. Previous studies have shown …
Living with noisy genes: how cells function reliably with inherent variability in gene expression
N Maheshri, EK O'Shea - Annu. Rev. Biophys. Biomol. Struct., 2007 - annualreviews.org
Within a population of genetically identical cells there can be significant variation, or noise,
in gene expression. Yet even with this inherent variability, cells function reliably. This review …
in gene expression. Yet even with this inherent variability, cells function reliably. This review …
[HTML][HTML] And the noise played on: stochastic gene expression and HIV-1 infection
WJ Blake, JJ Collins - Cell, 2005 - cell.com
Stochastic gene expression has been implicated in a variety of cellular processes, including
cell differentiation and disease. In this issue of Cell, Weinberger et al.(2005) take an …
cell differentiation and disease. In this issue of Cell, Weinberger et al.(2005) take an …
[HTML][HTML] Genetic noise control via protein oligomerization
CM Ghim, E Almaas - BMC systems biology, 2008 - Springer
Background Gene expression in a cell entails random reaction events occurring over
disparate time scales. Thus, molecular noise that often results in phenotypic and population …
disparate time scales. Thus, molecular noise that often results in phenotypic and population …
[HTML][HTML] Noise facilitates transcriptional control under dynamic inputs
RA Kellogg, S Tay - Cell, 2015 - cell.com
Cells must respond sensitively to time-varying inputs in complex signaling environments. To
understand how signaling networks process dynamic inputs into gene expression outputs …
understand how signaling networks process dynamic inputs into gene expression outputs …