The low noise limit in gene expression
Protein noise measurements are increasingly used to elucidate biophysical parameters.
Unfortunately noise analyses are often at odds with directly measured parameters. Here we …
Unfortunately noise analyses are often at odds with directly measured parameters. Here we …
Promoter sequence determines the relationship between expression level and noise
The ability of cells to accurately control gene expression levels in response to extracellular
cues is limited by the inherently stochastic nature of transcriptional regulation. A change in …
cues is limited by the inherently stochastic nature of transcriptional regulation. A change in …
Careful accounting of extrinsic noise in protein expression reveals correlations among its sources
JA Cole, Z Luthey-Schulten - Physical Review E, 2017 - APS
In order to grow and replicate, living cells must express a diverse array of proteins, but the
process by which proteins are made includes a great deal of inherent randomness …
process by which proteins are made includes a great deal of inherent randomness …
Teasing apart translational and transcriptional components of stochastic variations in eukaryotic gene expression
The intrinsic stochasticity of gene expression leads to cell-to-cell variations, noise, in protein
abundance. Several processes, including transcription, translation, and degradation of …
abundance. Several processes, including transcription, translation, and degradation of …
Transient changes in intercellular protein variability identify sources of noise in gene expression
A Singh - Biophysical Journal, 2014 - cell.com
Protein levels differ considerably between otherwise identical cells, and these differences
significantly affect biological function and phenotype. Previous work implicated various …
significantly affect biological function and phenotype. Previous work implicated various …
Tuning noise in gene expression
S Tyagi - Molecular systems biology, 2015 - embopress.org
The relative contribution of promoter architecture and the associated chromatin environment
in regulating gene expression noise has remained elusive. In their recent work, Arkin …
in regulating gene expression noise has remained elusive. In their recent work, Arkin …
[HTML][HTML] A common repressor pool results in indeterminacy of extrinsic noise
For just over a decade, stochastic gene expression has been the focus of many
experimental and theoretical studies. It is now widely accepted that noise in gene …
experimental and theoretical studies. It is now widely accepted that noise in gene …
Contribution of RNA polymerase concentration variation to protein expression noise
S Yang, S Kim, Y Rim Lim, C Kim, HJ An, JH Kim… - Nature …, 2014 - nature.com
Cell-to-cell variation in gene expression, or noise, is a general phenomenon observed
within cell populations. Transcription is known to be the key stage of gene expression where …
within cell populations. Transcription is known to be the key stage of gene expression where …
Genome-wide gene expression noise in Escherichia coli is condition-dependent and determined by propagation of noise through the regulatory network
A Urchueguía, L Galbusera, D Chauvin… - PLoS …, 2021 - journals.plos.org
Although it is well appreciated that gene expression is inherently noisy and that
transcriptional noise is encoded in a promoter's sequence, little is known about the extent to …
transcriptional noise is encoded in a promoter's sequence, little is known about the extent to …
Disentangling intrinsic and extrinsic gene expression noise in growing cells
J Lin, A Amir - Physical review letters, 2021 - APS
Gene expression is a stochastic process. Despite the increase of protein numbers in
growing cells, the protein concentrations are often found to be confined within small ranges …
growing cells, the protein concentrations are often found to be confined within small ranges …