Diagnostic histone modification analysis of individual preimplantation embryos

Y Zeng, Y Hoshino, K Susami, S Honda, N Minami… - bioRxiv, 2023 - biorxiv.org
Background: We previously reported a modification of the CUT&Tag method (NTU-CAT) that
allows genome-wide histone modification analysis in individual preimplantation embryos. In …

Evaluating histone modification analysis of individual preimplantation embryos

Y Zeng, Y Hoshino, K Susami, S Honda, N Minami… - BMC genomics, 2024 - Springer
Background We previously reported a modification of the CUT&Tag method (NTU-CAT) that
allows genome-wide histone modification analysis in individual preimplantation embryos. In …

Genome-wide profiling of histone H3K4me3 and H3K27me3 modifications in individual blastocysts by CUT&Tag without a solid support (NON-TiE-UP CUT&Tag)

K Susami, S Ikeda, Y Hoshino, S Honda, N Minami - Scientific Reports, 2022 - nature.com
Individual analysis of the epigenome of preimplantation embryos is useful for characterizing
each embryo and for investigating the effects of environmental factors on their epigenome …

Tn5 transposase-based epigenomic profiling methods are prone to open chromatin bias

M Wang, Y Zhang - bioRxiv, 2021 - biorxiv.org
Epigenetic studies of rare biological samples like mammalian oocytes and preimplantation
embryos require low input or even single cell epigenomic profiling methods. To reduce …

Current status of genome‐wide epigenetic profiling of mammalian preimplantation embryos

S Ikeda - Reproductive Medicine and Biology, 2023 - Wiley Online Library
Background Genome‐wide information on epigenetic modifications in mammalian
preimplantation embryos was an unexplored sanctuary of valuable research insights …

BEYOND CHROMOSOMAL ABERRATIONS–TRANSCRIPTOMIC PROFILES OF ANEUPLOID, MOSAIC, AND EUPLOID EMBRYOS FROM TROPHECTODERM …

S Madjunkova, B Wyse, NF Weizman, R Kharonsky… - Fertility and …, 2022 - fertstert.org
Objective The effects of aberrant chromosome dosage on gene expression and the
mechanisms that regulate the transcriptional processes in preimplantation embryos are …

Genome-wide histone modification profiling of inner cell mass and trophectoderm of bovine blastocysts by RAT-ChIP

T Org, K Hensen, R Kreevan, E Mark, O Sarv… - PLoS …, 2019 - journals.plos.org
Chromatin immunoprecipitation coupled with next-generation sequencing (ChIP-seq) has
revolutionized our understanding of chromatin-related biological processes. The method …

Analytical validation of a novel next-generation sequencing based preimplantation genetic screening technology

J Gole, T Mullen, G Celia, C Wagner, B Kaplan… - Fertility and …, 2016 - fertstert.org
Background Current data indicate that preimplantation genetic screening (PGS) increases
live birth and decreases miscarriage rates. However, high cost has limited its adoption. This …

Histone remodeling reflects conserved mechanisms of bovine and human preimplantation development

C Zhou, MM Halstead, A Bonnet‐Garnier… - EMBO …, 2023 - embopress.org
How histone modifications regulate changes in gene expression during preimplantation
development in any species remains poorly understood. Using CUT&Tag to overcome …

Analysis of accessible chromatin landscape in the inner cell mass and trophectoderm of human blastocysts

M Yang, X Tao, S Titus, T Zhao… - Molecular Human …, 2020 - academic.oup.com
Early embryonic development is characterized by drastic changes in chromatin structure that
affects the accessibility of the chromatin. In human, the chromosome reorganization and its …