[HTML][HTML] Sub-nucleosomal genome structure reveals distinct nucleosome folding motifs
Elucidating the global and local rules that govern genome-wide, hierarchical chromatin
architecture remains a critical challenge. Current high-throughput chromosome …
architecture remains a critical challenge. Current high-throughput chromosome …
A structural perspective on the where, how, why, and what of nucleosome positioning
The DNA in eukaryotic chromatin is packed by histones into arrays of repeating units called
nucleosomes. Each nucleosome contains a nucleosome core, where the DNA is wrapped …
nucleosomes. Each nucleosome contains a nucleosome core, where the DNA is wrapped …
Mechanisms underlying nucleosome positioning in vivo
AL Hughes, OJ Rando - Annual review of biophysics, 2014 - annualreviews.org
It has been some 40 years since repeating subunits in eukaryotic chromatin, initially termed
“nu bodies,” were described. Four decades of study have characterized the structural …
“nu bodies,” were described. Four decades of study have characterized the structural …
Genome-wide nucleosome specificity and directionality of chromatin remodelers
K Yen, V Vinayachandran, K Batta, RT Koerber… - Cell, 2012 - cell.com
How chromatin remodelers cooperate to organize nucleosomes around the start and end of
genes is not known. We determined the genome-wide binding of remodeler complexes …
genes is not known. We determined the genome-wide binding of remodeler complexes …
Beads on a string—nucleosome array arrangements and folding of the chromatin fiber
Understanding how the genome is structurally organized as chromatin is essential for
understanding its function. Here, we review recent developments that allowed the …
understanding its function. Here, we review recent developments that allowed the …
[HTML][HTML] Genome-wide “re”-modeling of nucleosome positions
R Sadeh, CD Allis - Cell, 2011 - cell.com
Two recent studies mapped nucleosomes across the yeast and human genomes, teasing
apart the relative contributions of DNA sequence and chromatin remodelers to nucleosome …
apart the relative contributions of DNA sequence and chromatin remodelers to nucleosome …
A functional evolutionary approach to identify determinants of nucleosome positioning: a unifying model for establishing the genome-wide pattern
Although the genomic pattern of nucleosome positioning is broadly conserved, quantitative
aspects vary over evolutionary timescales. We identify the cis and trans determinants of …
aspects vary over evolutionary timescales. We identify the cis and trans determinants of …
Nucleosome positioning and spacing: from mechanism to function
AK Singh, F Mueller-Planitz - Journal of Molecular Biology, 2021 - Elsevier
Eukaryotes associate their genomes with histone proteins, forming nucleosome particles.
Nucleosomes regulate and protect the genetic information. They often assemble into evenly …
Nucleosomes regulate and protect the genetic information. They often assemble into evenly …
[HTML][HTML] The nucleosome: from genomic organization to genomic regulation
S Khorasanizadeh - Cell, 2004 - cell.com
Electron micrographs first confirmed that the eukaryotic genome is organized into repeating
disk-shaped nucleosomal units composed of histones and their associated DNA. Those …
disk-shaped nucleosomal units composed of histones and their associated DNA. Those …
A compendium of nucleosome and transcript profiles reveals determinants of chromatin architecture and transcription
H van Bakel, K Tsui, M Gebbia, S Mnaimneh… - PLoS …, 2013 - journals.plos.org
Nucleosomes in all eukaryotes examined to date adopt a characteristic architecture within
genes and play fundamental roles in regulating transcription, yet the identity and precise …
genes and play fundamental roles in regulating transcription, yet the identity and precise …