Homoeolog expression bias in allopolyploid oleaginous marine diatom Fistulifera solaris
T Nomaguchi, Y Maeda, T Yoshino, T Asahi, L Tirichine… - BMC genomics, 2018 - Springer
Background Allopolyploidy is a genomic structure wherein two or more sets of chromosomes
derived from divergent parental species coexist within an organism. It is a prevalent genomic …
derived from divergent parental species coexist within an organism. It is a prevalent genomic …
Chromosome-Scale Genome Assembly of the Marine Oleaginous Diatom Fistulifera solaris
Y Maeda, R Kobayashi, K Watanabe, T Yoshino… - Marine …, 2022 - Springer
Microalgae including diatoms are of interest for environmentally friendly manufacturing such
as production of biofuels, chemicals, and materials. The highly oil-accumulating marine …
as production of biofuels, chemicals, and materials. The highly oil-accumulating marine …
Oil Accumulation by the Oleaginous Diatom Fistulifera solaris as Revealed by the Genome and Transcriptome
Oleaginous photosynthetic organisms such as microalgae are promising sources for biofuel
production through the generation of carbon-neutral sustainable energy. However, the …
production through the generation of carbon-neutral sustainable energy. However, the …
Mitotic recombination between homologous chromosomes drives genomic diversity in diatoms
Diatoms, an evolutionarily successful group of microalgae, display high levels of
intraspecific genetic variability in natural populations. However, the contribution of various …
intraspecific genetic variability in natural populations. However, the contribution of various …
The transcriptome of the novel dinoflagellate Oxyrrhis marina (Alveolata: Dinophyceae): response to salinity examined by 454 sequencing
Abstract Background The heterotrophic dinoflagellate Oxyrrhis marina is increasingly
studied in experimental, ecological and evolutionary contexts. Its basal phylogenetic …
studied in experimental, ecological and evolutionary contexts. Its basal phylogenetic …
Evidence that inconsistent gene prediction can mislead analysis of dinoflagellate genomes
Comparative algal genomics often relies on predicted genes from de novo assembled
genomes. However, the artifacts introduced by different gene‐prediction approaches, and …
genomes. However, the artifacts introduced by different gene‐prediction approaches, and …
Foreign gene recruitment to the fatty acid biosynthesis pathway in diatoms
CX Chan, FL Baglivi, CE Jenkins… - Mobile Genetic …, 2013 - Taylor & Francis
Diatoms are highly successful marine and freshwater algae that contribute up to 20% of
global carbon fixation. These species are leading candidates for biofuel production owing to …
global carbon fixation. These species are leading candidates for biofuel production owing to …
Genomes Vary in Size and Spatial Patterns Within Chimeric Blades of Porphyra spp.
E Varela-Álvarez, J Loureiro, PG Meirmans… - Frontiers in Marine …, 2021 - frontiersin.org
Genome size variation is of crucial biological importance, however variation in genome
sizes within a single individual/organism is rarely reported except for some species groups …
sizes within a single individual/organism is rarely reported except for some species groups …
Re-examination of two diatom reference genomes using long-read sequencing
Abstract Background The marine diatoms Thalassiosira pseudonana and Phaeodactylum
tricornutum are valuable model organisms for exploring the evolution, diversity and ecology …
tricornutum are valuable model organisms for exploring the evolution, diversity and ecology …
Genome and methylome of the oleaginous diatom Cyclotella cryptica reveal genetic flexibility toward a high lipid phenotype
JC Traller, SJ Cokus, DA Lopez, O Gaidarenko… - Biotechnology for …, 2016 - Springer
Background Improvement in the performance of eukaryotic microalgae for biofuel and
bioproduct production is largely dependent on characterization of metabolic mechanisms …
bioproduct production is largely dependent on characterization of metabolic mechanisms …