Differences in activity and stability drive transposable element variation in tropical and temperate maize
Much of the profound interspecific variation in genome content has been attributed to
transposable elements (TEs). To explore the extent of TE variation within species, we …
transposable elements (TEs). To explore the extent of TE variation within species, we …
Whole-genome variation of transposable element insertions in a maize diversity panel
Y Qiu, CH O'Connor, R Della Coletta, JS Renk… - G3, 2021 - academic.oup.com
Intact transposable elements (TEs) account for 65% of the maize genome and can impact
gene function and regulation. Although TEs comprise the majority of the maize genome and …
gene function and regulation. Although TEs comprise the majority of the maize genome and …
Transposable elements contribute to dynamic genome content in maize
SN Anderson, MC Stitzer, AB Brohammer… - The Plant …, 2019 - Wiley Online Library
Transposable elements (TE s) are ubiquitous components of eukaryotic genomes and can
create variation in genome organization and content. Most maize genomes are composed of …
create variation in genome organization and content. Most maize genomes are composed of …
[HTML][HTML] Genome-wide characterization of non-reference transposable element insertion polymorphisms reveals genetic diversity in tropical and temperate maize
X Lai, JC Schnable, Z Liao, J Xu, G Zhang, C Li, E Hu… - BMC genomics, 2017 - Springer
Background Maize was originally domesticated in a tropical environment but is now widely
cultivated at temperate latitudes. Temperate and tropical maize populations have diverged …
cultivated at temperate latitudes. Temperate and tropical maize populations have diverged …
Dynamic patterns of transcript abundance of transposable element families in maize
Abstract Transposable Elements (TEs) are mobile elements that contribute the majority of
DNA sequences in the maize genome. Due to their repetitive nature, genomic studies of TEs …
DNA sequences in the maize genome. Due to their repetitive nature, genomic studies of TEs …
[HTML][HTML] The genomic ecosystem of transposable elements in maize
Transposable elements (TEs) constitute the majority of flowering plant DNA, reflecting their
tremendous success in subverting, avoiding, and surviving the defenses of their host …
tremendous success in subverting, avoiding, and surviving the defenses of their host …
[HTML][HTML] Combined analysis of transposable elements and structural variation in maize genomes reveals genome contraction outpaces expansion
Structural differences between genomes are a major source of genetic variation that
contributes to phenotypic differences. Transposable elements, mobile genetic sequences …
contributes to phenotypic differences. Transposable elements, mobile genetic sequences …
The bright side of transposons in crop evolution
C Vitte, MA Fustier, K Alix… - Briefings in Functional …, 2014 - academic.oup.com
The past decades have revealed an unexpected yet prominent role of so-called 'junk DNA'in
the regulation of gene expression, thereby challenging our view of the mechanisms …
the regulation of gene expression, thereby challenging our view of the mechanisms …
Cis-regulatory elements within TEs can influence expression of nearby maize genes
Transposable elements (TEs) have the potential to create regulatory variation both through
disruption of existing DNA regulatory elements and through creation of novel DNA …
disruption of existing DNA regulatory elements and through creation of novel DNA …
[HTML][HTML] A review of strategies used to identify transposition events in plant genomes
M Bajus, A Macko-Podgórni, D Grzebelus… - Frontiers in Plant …, 2022 - frontiersin.org
Transposable elements (TEs) were initially considered redundant and dubbed 'junk DNA'.
However, more recently they were recognized as an essential element of genome plasticity …
However, more recently they were recognized as an essential element of genome plasticity …
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