Quantifying fibrillar collagen organization with curvelet transform-based tools
Y Liu, KW Eliceiri - JoVE (Journal of Visualized Experiments), 2020 - jove.com
Fibrillar collagens are prominent extracellular matrix (ECM) components, and their topology
changes have been shown to be associated with the progression of a wide range of …
changes have been shown to be associated with the progression of a wide range of …
[HTML][HTML] Fibrillar collagen quantification with curvelet transform based computational methods
Y Liu, A Keikhosravi, CA Pehlke… - … in bioengineering and …, 2020 - frontiersin.org
Quantification of fibrillar collagen organization has given new insight into the possible role of
collagen topology in many diseases and has also identified candidate image-based bio …
collagen topology in many diseases and has also identified candidate image-based bio …
Methods for quantifying fibrillar collagen alignment
Y Liu, A Keikhosravi, GS Mehta, CR Drifka… - Fibrosis: methods and …, 2017 - Springer
Recent evidence has implicated collagen, particularly fibrillar collagen, in a number of
diseases ranging from osteogenesis imperfecta and asthma to breast and ovarian cancer. A …
diseases ranging from osteogenesis imperfecta and asthma to breast and ovarian cancer. A …
Collagen fiber centerline tracking in fibrotic tissue via deep neural networks with variational autoencoder-based synthetic training data generation
The role of fibrillar collagen in the tissue microenvironment is critical in disease contexts
ranging from cancers to chronic inflammations, as evidenced by many studies. Quantifying …
ranging from cancers to chronic inflammations, as evidenced by many studies. Quantifying …
Quantitative classification of 3D collagen fiber organization from volumetric images
Collagen fibers in biological tissues have a complex 3D organization containing rich
information linked to tissue mechanical properties and are affected by mutations that lead to …
information linked to tissue mechanical properties and are affected by mutations that lead to …
[HTML][HTML] Rapid quantification of 3D collagen fiber alignment and fiber intersection correlations with high sensitivity
Metastatic cancers aggressively reorganize collagen in their microenvironment. For
example, radially orientated collagen fibers have been observed surrounding tumor cell …
example, radially orientated collagen fibers have been observed surrounding tumor cell …
A fast, robust method for quantitative assessment of collagen fibril architecture from transmission electron micrographs
Collagen is the most abundant protein in mammals; it exhibits a hierarchical organization
and provides structural support to a wide range of soft tissues, including blood vessels. The …
and provides structural support to a wide range of soft tissues, including blood vessels. The …
[HTML][HTML] Navigating the collagen jungle: the biomedical potential of fiber organization in cancer
JN Ouellette, CR Drifka, KB Pointer, Y Liu… - Bioengineering, 2021 - mdpi.com
Recent research has highlighted the importance of key tumor microenvironment features,
notably the collagen-rich extracellular matrix (ECM) in characterizing tumor invasion and …
notably the collagen-rich extracellular matrix (ECM) in characterizing tumor invasion and …
Correction: Rapid Quantification of 3D Collagen Fiber Alignment and Fiber Intersection Correlations with High Sensitivity
M Sun, AB Bloom, MH Zaman - Plos one, 2016 - journals.plos.org
In the version of this article initially published, the authors acknowledged the research
support from the National Institutes of Health (U01-CA177799) and the National Science …
support from the National Institutes of Health (U01-CA177799) and the National Science …
[HTML][HTML] Non-disruptive collagen characterization in clinical histopathology using cross-modality image synthesis
The importance of fibrillar collagen topology and organization in disease progression and
prognostication in different types of cancer has been characterized extensively in many …
prognostication in different types of cancer has been characterized extensively in many …