JPred4: a protein secondary structure prediction server
Abstract JPred4 (http://www. compbio. dundee. ac. uk/jpred4) is the latest version of the
popular JPred protein secondary structure prediction server which provides predictions by …
popular JPred protein secondary structure prediction server which provides predictions by …
The Jpred 3 secondary structure prediction server
Abstract Jpred (http://www. compbio. dundee. ac. uk/jpred) is a secondary structure
prediction server powered by the Jnet algorithm. Jpred performs over 1000 predictions per …
prediction server powered by the Jnet algorithm. Jpred performs over 1000 predictions per …
Improving the accuracy of protein secondary structure prediction using structural alignment
S Montgomerie, S Sundararaj, WJ Gallin, DS Wishart - BMC bioinformatics, 2006 - Springer
Background The accuracy of protein secondary structure prediction has steadily improved
over the past 30 years. Now many secondary structure prediction methods routinely achieve …
over the past 30 years. Now many secondary structure prediction methods routinely achieve …
Exploiting the past and the future in protein secondary structure prediction
Motivation: Predicting the secondary structure of a protein (alpha-helix, beta-sheet, coil) is
an important step towards elucidating its three-dimensional structure, as well as its function …
an important step towards elucidating its three-dimensional structure, as well as its function …
JPred: a consensus secondary structure prediction server.
An interactive protein secondary structure prediction Internet server is presented. The server
allows a single sequence or multiple alignment to be submitted, and returns predictions from …
allows a single sequence or multiple alignment to be submitted, and returns predictions from …
Protein secondary structure prediction using neural networks and deep learning: A review
Literature contains over fifty years of accumulated methods proposed by researchers for
predicting the secondary structures of proteins in silico. A large part of this collection is …
predicting the secondary structures of proteins in silico. A large part of this collection is …
The PSIPRED protein structure prediction server
The PSIPRED protein structure prediction server allows users to submit a protein sequence,
perform a prediction of their choice and receive the results of the prediction both textually via …
perform a prediction of their choice and receive the results of the prediction both textually via …
Application of multiple sequence alignment profiles to improve protein secondary structure prediction
The effect of training a neural network secondary structure prediction algorithm with different
types of multiple sequence alignment profiles derived from the same sequences, is shown to …
types of multiple sequence alignment profiles derived from the same sequences, is shown to …
Redefining the goals of protein secondary structure prediction
Secondary structure prediction recently has surpassed the 70% level of average accuracy,
evaluated on the single residue states helix, strand and loop (Q 3). But the ultimate goal is …
evaluated on the single residue states helix, strand and loop (Q 3). But the ultimate goal is …
Sixty-five years of the long march in protein secondary structure prediction: the final stretch?
Protein secondary structure prediction began in 1951 when Pauling and Corey predicted
helical and sheet conformations for protein polypeptide backbone even before the first …
helical and sheet conformations for protein polypeptide backbone even before the first …