Genome-scale phylogeny and contrasting modes of genome evolution in the fungal phylum Ascomycota

XX Shen, JL Steenwyk, AL LaBella, DA Opulente… - Science …, 2020 - science.org
Ascomycota, the largest and most well-studied phylum of fungi, contains three subphyla:
Saccharomycotina (budding yeasts), Pezizomycotina (filamentous fungi), and …

Genome-level analyses resolve an ancient lineage of symbiotic ascomycetes

D Díaz-Escandón, G Tagirdzhanova, D Vanderpool… - Current Biology, 2022 - cell.com
Ascomycota account for about two-thirds of named fungal species. 1 Over 98% of known
Ascomycota belong to the Pezizomycotina, including many economically important species …

[HTML][HTML] Advances in understanding the evolution of fungal genome architecture

SJ Priest, V Yadav, J Heitman - F1000Research, 2020 - ncbi.nlm.nih.gov
Diversity within the fungal kingdom is evident from the wide range of morphologies fungi
display as well as the various ecological roles and industrial purposes they serve …

A consistent phylogenetic backbone for the fungi

I Ebersberger, R de Matos Simoes… - Molecular Biology …, 2012 - academic.oup.com
The kingdom of fungi provides model organisms for biotechnology, cell biology, genetics,
and life sciences in general. Only when their phylogenetic relationships are stably resolved …

A novel mode of chromosomal evolution peculiar to filamentous Ascomycete fungi

JK Hane, T Rouxel, BJ Howlett, GHJ Kema… - Genome biology, 2011 - Springer
Background Gene loss, inversions, translocations, and other chromosomal rearrangements
vary among species, resulting in different rates of structural genome evolution. Major …

A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis

DA Fitzpatrick, ME Logue, JE Stajich, G Butler - BMC evolutionary biology, 2006 - Springer
Background To date, most fungal phylogenies have been derived from single gene
comparisons, or from concatenated alignments of a small number of genes. The increase in …

A genome-informed higher rank classification of the biotechnologically important fungal subphylum Saccharomycotina

M Groenewald, CT Hittinger, K Bensch… - Studies in …, 2023 - ingentaconnect.com
The subphylum Saccharomycotina is a lineage in the fungal phylum Ascomycota that
exhibits levels of genomic diversity similar to those of plants and animals. The …

The evolving fungal genome

EH Stukenbrock, D Croll - Fungal Biology Reviews, 2014 - Elsevier
Fungal genomes vary considerably in size and organization. The genome of Microsporidium
contains less than 3 Mb while the genomes of several Basidiomycetes and Ascomycetes …

New molecular markers for fungal phylogenetics: two genes for species-level systematics in the Sordariomycetes (Ascomycota)

DM Walker, LA Castlebury, AY Rossman… - Molecular Phylogenetics …, 2012 - Elsevier
Although significant progress has been made resolving deep branches of the fungal tree of
life, many fungal systematists are interested in species-level questions to both define …

Phylogenomic Analyses Support the Monophyly of Taphrinomycotina, including Schizosaccharomyces Fission Yeasts

Y Liu, JW Leigh, H Brinkmann… - Molecular biology …, 2009 - academic.oup.com
Several morphologically dissimilar ascomycete fungi including Schizosaccharomyces,
Taphrina, Saitoella, Pneumocystis, and Neolecta have been grouped into the taxon …