SEVA 4.0: an update of the Standard European Vector Architecture database for advanced analysis and programming of bacterial phenotypes

E Martínez-García, S Fraile, E Algar… - Nucleic Acids …, 2023 - academic.oup.com
Abstract The SEVA platform (https://seva-plasmids. com) was launched one decade ago,
both as a database (DB) and as a physical repository of plasmid vectors for genetic analysis …

SEVA 3.0: an update of the Standard European Vector Architecture for enabling portability of genetic constructs among diverse bacterial hosts

E Martínez-García, A Goni-Moreno… - Nucleic acids …, 2020 - academic.oup.com
Abstract The Standard European Vector Architecture 3.0 database (SEVA-DB 3.0,
http://seva. cnb. csic. es) is the update of the platform launched in 2013 both as a web-based …

The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes

R Silva-Rocha, E Martínez-García, B Calles… - Nucleic acids …, 2013 - academic.oup.com
Abstract The 'Standard European Vector Architecture'database (SEVA-DB, http://seva. cnb.
csic. es) was conceived as a user-friendly, web-based resource and a material clone …

SEVA 2.0: an update of the Standard European Vector Architecture for de-/re-construction of bacterial functionalities

E Martínez-García, T Aparicio… - Nucleic acids …, 2015 - academic.oup.com
Abstract The Standard European Vector Architecture 2.0 database (SEVA-DB 2.0,
http://seva. cnb. csic. es) is an improved and expanded version of the platform released in …

The art of vector engineering: towards the construction of next‐generation genetic tools

LC Nora, CA Westmann… - Microbial …, 2019 - Wiley Online Library
When recombinant DNA technology was developed more than 40 years ago, no one could
have imagined the impact it would have on both society and the scientific community. In the …

SEVA 3.1: enabling interoperability of DNA assembly among the SEVA, BioBricks and Type IIS restriction enzyme standards

SG Damalas, C Batianis… - Microbial …, 2020 - Wiley Online Library
Robust synthetic biology applications rely heavily on the design and assembly of DNA parts
with specific functionalities based on engineering principles. However, the assembly …

[HTML][HTML] pBAM1: an all-synthetic genetic tool for analysis and construction of complex bacterial phenotypes

E Martínez-García, B Calles, M Arévalo-Rodríguez… - BMC microbiology, 2011 - Springer
Background Since publication in 1977 of plasmid pBR322, many breakthroughs in Biology
have depended on increasingly sophisticated vector platforms for analysis and engineering …

The Marburg Collection: A Golden Gate DNA Assembly Framework for Synthetic Biology Applications in Vibrio natriegens

D Stukenberg, T Hensel, J Hoff, B Daniel… - ACS synthetic …, 2021 - ACS Publications
Vibrio natriegens is known as the world's fastest growing organism with a doubling time of
less than 10 min. This incredible growth speed empowers V. natriegens as a chassis for …

Programming biological operating systems: genome design, assembly and activation

DG Gibson - Nature methods, 2014 - nature.com
The DNA technologies developed over the past 20 years for reading and writing the genetic
code converged when the first synthetic cell was created 4 years ago. An outcome of this …

EDGAR 2.0: an enhanced software platform for comparative gene content analyses

J Blom, J Kreis, S Spänig, T Juhre… - Nucleic acids …, 2016 - academic.oup.com
The rapidly increasing availability of microbial genome sequences has led to a growing
demand for bioinformatics software tools that support the functional analysis based on the …