[HTML][HTML] Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences

MF Berger, G Badis, AR Gehrke, S Talukder… - Cell, 2008 - cell.com
Most homeodomains are unique within a genome, yet many are highly conserved across
vast evolutionary distances, implying strong selection on their precise DNA-binding …

[HTML][HTML] Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites

MB Noyes, RG Christensen, A Wakabayashi… - Cell, 2008 - cell.com
We describe the comprehensive characterization of homeodomain DNA-binding specificities
from a metazoan genome. The analysis of all 84 independent homeodomains from D …

Conservation and diversification in homeodomain-DNA interactions: a comparative genetic analysis.

DS Wilson, G Sheng, S Jun… - Proceedings of the …, 1996 - National Acad Sciences
Nearly all metazoan homeodomains (HDs) possess DNA binding targets that are related by
the presence of a TAAT sequence. We use an in vitro genetic DNA binding site selection …

Homeodomain interactions

C Wolberger - Current opinion in structural biology, 1996 - Elsevier
Homeodomain proteins play key roles in development and gene regulation in eukaryotes.
Past structural studies have focused on the binding of monomeric homeodomains to DNA …

Nucleotides flanking a conserved TAAT core dictate the DNA binding specificity of three murine homeodomain proteins

KM Catron, N Iler, C Abate - Molecular and cellular biology, 1993 - Am Soc Microbiol
Murine homeobox genes play a fundamental role in directing embryogenesis by controlling
gene expression during development. The homeobox encodes a DNA binding domain (the …

Homeodomain proteins: an update

TR Bürglin, M Affolter - Chromosoma, 2016 - Springer
Here, we provide an update of our review on homeobox genes that we wrote together with
Walter Gehring in 1994. Since then, comprehensive surveys of homeobox genes have …

[引用][C] Homeobox proteins as sequence-specific transcription factors

M Levine, T Hoey - Cell, 1988 - Elsevier
The homeobox is a 180 bp protein-coding sequence found in nearly every eukaryote that
has been investigated, spanning a broad evolutionary spectrum from yeast to man …

Cooperative dimerization of paired class homeo domains on DNA.

D Wilson, G Sheng, T Lecuit, N Dostatni… - Genes & …, 1993 - genesdev.cshlp.org
Homeo domain-containing proteins mediate many transcriptional processes in eukaryotes.
Because nearly all animal homeo proteins are believed to bind to short, highly related DNA …

Homeodomain-DNA recognition

WJ Gehring, YQ Qian, M Billeter… - Cell, 1994 - Elsevier
Homeodomain-DNA Recognition Review Page 1 Cell, Vol. 79, 211-223, July 29, 1994, Copyright
0 1994 by Cell Press Homeodomain-DNA Recognition Review Waiter J. Gehring; Yan Giu …

Covariation of residues in the homeodomain sequence family

ND Clarke - Protein Science, 1995 - Wiley Online Library
Homeodomains are 60 amino acid DNA binding domains found in numerous eukaryotic
transcription factors. The homeodomain family is a useful system for studying sequence …