[HTML][HTML] Challenges for biophysical modeling of microstructure

IO Jelescu, M Palombo, F Bagnato… - Journal of Neuroscience …, 2020 - Elsevier
The biophysical modeling efforts in diffusion MRI have grown considerably over the past 25
years. In this review, we dwell on the various challenges along the journey of bringing a …

Imaging brain microstructure with diffusion MRI: practicality and applications

DC Alexander, TB Dyrby, M Nilsson… - NMR in …, 2019 - Wiley Online Library
This article gives an overview of microstructure imaging of the brain with diffusion MRI and
reviews the state of the art. The microstructure‐imaging paradigm aims to estimate and map …

Validation strategies for the interpretation of microstructure imaging using diffusion MRI

TB Dyrby, GM Innocenti, M Bech, H Lundell - Neuroimage, 2018 - Elsevier
Extracting microanatomical information beyond the image resolution of MRI would provide
valuable tools for diagnostics and neuroscientific research. A number of mathematical …

A ranking of diffusion MRI compartment models with in vivo human brain data

U Ferizi, T Schneider, E Panagiotaki… - Magnetic resonance …, 2014 - Wiley Online Library
Purpose Diffusion magnetic resonance imaging (MRI) microstructure imaging provides a
unique noninvasive probe into tissue microstructure. The technique relies on biophysically …

[HTML][HTML] Robust and fast nonlinear optimization of diffusion MRI microstructure models

RL Harms, FJ Fritz, A Tobisch, R Goebel, A Roebroeck - Neuroimage, 2017 - Elsevier
Advances in biophysical multi-compartment modeling for diffusion MRI (dMRI) have gained
popularity because of greater specificity than DTI in relating the dMRI signal to underlying …

[HTML][HTML] The sensitivity of diffusion MRI to microstructural properties and experimental factors

M Afzali, T Pieciak, S Newman, E Garyfallidis… - Journal of Neuroscience …, 2021 - Elsevier
Diffusion MRI is a non-invasive technique to study brain microstructure. Differences in the
microstructural properties of tissue, including size and anisotropy, can be represented in the …

[HTML][HTML] Disentangling micro from mesostructure by diffusion MRI: a Bayesian approach

M Reisert, E Kellner, B Dhital, J Hennig, VG Kiselev - Neuroimage, 2017 - Elsevier
Diffusion-sensitized magnetic resonance imaging probes the cellular structure of the human
brain, but the primary microstructural information gets lost in averaging over higher-level …

Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation

DS Novikov, E Fieremans, SN Jespersen… - NMR in …, 2019 - Wiley Online Library
We review, systematize and discuss models of diffusion in neuronal tissue, by putting them
into an overarching physical context of coarse‐graining over an increasing diffusion length …

[HTML][HTML] Probing brain tissue microstructure with MRI: principles, challenges, and the role of multidimensional diffusion-relaxation encoding

B Lampinen, F Szczepankiewicz, J Lätt, L Knutsson… - NeuroImage, 2023 - Elsevier
Diffusion MRI uses the random displacement of water molecules to sensitize the signal to
brain microstructure and to properties such as the density and shape of cells. Microstructure …

A general framework for experiment design in diffusion MRI and its application in measuring direct tissue‐microstructure features

DC Alexander - Magnetic Resonance in Medicine: An Official …, 2008 - Wiley Online Library
This article introduces a new and general framework for optimizing the experiment design
for diffusion MRI of samples with unknown orientation. An illustration then uses the …