[PDF][PDF] Phase separation as a missing mechanism for interpretation of disease mutations

B Tsang, I Pritišanac, SW Scherer, AM Moses… - Cell, 2020 - cell.com
It is unclear how disease mutations impact intrinsically disordered protein regions (IDRs),
which lack a stable folded structure. These mutations, while prevalent in disease, are …

How do intrinsically disordered protein regions encode a driving force for liquid–liquid phase separation?

W Borcherds, A Bremer, MB Borgia, T Mittag - Current opinion in structural …, 2021 - Elsevier
Highlights•Not all IDRs undergo liquid–liquid phase separation.•IDRs are not necessary for
protein phase separation.•A stickers-and-spacers framework helps conceptualizing IDR …

Disease mutations in disordered regions—exception to the rule?

V Vacic, LM Iakoucheva - Molecular BioSystems, 2012 - pubs.rsc.org
Intrinsically disordered proteins (IDPs) have been implicated in a number of human
diseases, including cancer, diabetes, neurodegenerative and cardiovascular disorders …

Intrinsically disordered protein regions and phase separation: sequence determinants of assembly or lack thereof.

EW Martin, AS Holehouse - Emerging topics in life sciences, 2020 - europepmc.org
Intrinsically disordered protein regions (IDRs)-regions that do not fold into a fixed three-
dimensional structure but instead exist in a heterogeneous ensemble of conformations-have …

Disease-associated mutations disrupt functionally important regions of intrinsic protein disorder

V Vacic, PRL Markwick, CJ Oldfield, X Zhao, C Haynes… - 2012 - journals.plos.org
The effects of disease mutations on protein structure and function have been extensively
investigated, and many predictors of the functional impact of single amino acid substitutions …

[PDF][PDF] Intrinsically disordered proteins link alternative splicing and post-translational modifications to complex cell signaling and reulation

J Zhou, S Zhao, AK Dunker - Biophysical Journal, 2018 - cell.com
Intrinsically disordered regions (IDRs) make up ca. 30% of the proteome of most eukaryotes,
and are involved in a diverse set of functions. Conventional sequence alignment tools …

Intrinsically Disordered Proteins in Human Diseases: Introducing the D2 Concept

VN Uversky, CJ Oldfield, AK Dunker - Annu. Rev. Biophys., 2008 - annualreviews.org
Intrinsically disordered proteins (IDPs) lack stable tertiary and/or secondary structures under
physiological conditions in vitro. They are highly abundant in nature and their functional …

Identifying sequence perturbations to an intrinsically disordered protein that determine its phase-separation behavior

BS Schuster, GL Dignon, WS Tang… - Proceedings of the …, 2020 - National Acad Sciences
Phase separation of intrinsically disordered proteins (IDPs) commonly underlies the
formation of membraneless organelles, which compartmentalize molecules intracellularly in …

Systematic identification of conditionally folded intrinsically disordered regions by AlphaFold2

TR Alderson, I Pritišanac, Đ Kolarić… - Proceedings of the …, 2023 - National Acad Sciences
The AlphaFold Protein Structure Database contains predicted structures for millions of
proteins. For the majority of human proteins that contain intrinsically disordered regions …

[HTML][HTML] On the potential of machine learning to examine the relationship between sequence, structure, dynamics and function of intrinsically disordered proteins

K Lindorff-Larsen, BB Kragelund - Journal of Molecular Biology, 2021 - Elsevier
Intrinsically disordered proteins (IDPs) constitute a broad set of proteins with few uniting and
many diverging properties. IDPs—and intrinsically disordered regions (IDRs) interspersed …