New-generation sequencing technology in diagnosis of fungal plant pathogens: a dream comes true?
M Aragona, A Haegi, MT Valente, L Riccioni, L Orzali… - Journal of Fungi, 2022 - mdpi.com
The fast and continued progress of high-throughput sequencing (HTS) and the drastic
reduction of its costs have boosted new and unpredictable developments in the field of plant …
reduction of its costs have boosted new and unpredictable developments in the field of plant …
Metagenomics next generation sequencing (mNGS): an exciting tool for early and accurate diagnostic of fungal pathogens in plants
FŞ Gökdemir, ÖD İşeri, A Sharma, PN Achar… - Journal of Fungi, 2022 - mdpi.com
Crop output is directly impacted by infections, with fungi as the major plant pathogens,
making accurate diagnosis of these threats crucial. Developing technology and …
making accurate diagnosis of these threats crucial. Developing technology and …
One fungus, one name promotes progressive plant pathology
MJ Wingfield, ZW De Beer, B Slippers… - Molecular plant …, 2012 - Wiley Online Library
The robust and reliable identification of fungi underpins virtually every element of plant
pathology, from disease diagnosis to studies of biology, management/control, quarantine …
pathology, from disease diagnosis to studies of biology, management/control, quarantine …
Recent advances in molecular techniques for the identification of phytopathogenic fungi–a mini review
ABSTRACT At present, 1.5 million species of fungi are estimated. Among these less than 5%
have been described. Many fungal species cause disease in plants. These diseases cause …
have been described. Many fungal species cause disease in plants. These diseases cause …
New (and used) approaches to the study of fungal pathogenicity
SE Gold, MD García-Pedrajas… - Annual review of …, 2001 - annualreviews.org
▪ Abstract The fungi are the most economically important plant pathogens and continue to be
the focus of extensive research with a wide variety of methodologies. Enhancements in …
the focus of extensive research with a wide variety of methodologies. Enhancements in …
Diagnosis of fungal plant pathogens using conventional and molecular approaches
MC Dayarathne, AU Mridha… - Diagnostics of plant …, 2020 - books.google.com
Fungi are a large group of eukaryotes found as saprophytes, pathogens or endophytes,
which distribute in every corner of our planet. As the main pathogens, fungi can cause 70 …
which distribute in every corner of our planet. As the main pathogens, fungi can cause 70 …
The dawn of fungal pathogen genomics
JR Xu, YL Peng, MB Dickman… - Annu. Rev. Phytopathol …, 2006 - annualreviews.org
Recent advances in sequencing technologies have led to a remarkable increase in the
number of sequenced fungal genomes. Several important plant pathogenic fungi are among …
number of sequenced fungal genomes. Several important plant pathogenic fungi are among …
Improving ITS sequence data for identification of plant pathogenic fungi
Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial
impacts on natural ecosystems and human endeavours. These taxa often have complex and …
impacts on natural ecosystems and human endeavours. These taxa often have complex and …
Genome sequencing
Y Yoshinaga, C Daum, G He, R O'Malley - Fungal Genomics: Methods and …, 2018 - Springer
Strategies for sequencing fungal genomes on next-generation sequencing (NGS) platforms
depend on the characteristics of the genome of the targeted species, quantity and quality of …
depend on the characteristics of the genome of the targeted species, quantity and quality of …
Rapid genomic diagnosis of fungal infections in the age of next-generation sequencing
CC Tsang, JLL Teng, SKP Lau, PCY Woo - Journal of Fungi, 2021 - mdpi.com
Next-generation sequencing (NGS) technologies have recently developed beyond the
research realm and started to mature into clinical applications. Here, we review the current …
research realm and started to mature into clinical applications. Here, we review the current …