[HTML][HTML] Prediction of effector protein structures from fungal phytopathogens enables evolutionary analyses
K Seong, KV Krasileva - Nature Microbiology, 2023 - nature.com
Elucidating the similarity and diversity of pathogen effectors is critical to understand their
evolution across fungal phytopathogens. However, rapid divergence that diminishes …
evolution across fungal phytopathogens. However, rapid divergence that diminishes …
EffectorP: predicting fungal effector proteins from secretomes using machine learning
Eukaryotic filamentous plant pathogens secrete effector proteins that modulate the host cell
to facilitate infection. Computational effector candidate identification and subsequent …
to facilitate infection. Computational effector candidate identification and subsequent …
[HTML][HTML] Computational prediction of effector proteins in fungi: opportunities and challenges
Effector proteins are mostly secretory proteins that stimulate plant infection by manipulating
the host response. Identifying fungal effector proteins and understanding their function is of …
the host response. Identifying fungal effector proteins and understanding their function is of …
Computational Structural Genomics Unravels Common Folds and Novel Families in the Secretome of Fungal Phytopathogen Magnaporthe oryzae
K Seong, KV Krasileva - Molecular Plant-Microbe Interactions, 2021 - Am Phytopath Society
Structural biology has the potential to illuminate the evolution of pathogen effectors and their
commonalities that cannot be readily detected at the primary sequence level. Recent …
commonalities that cannot be readily detected at the primary sequence level. Recent …
[HTML][HTML] Effector biology of biotrophic plant fungal pathogens: Current advances and future prospects
R Jaswal, K Kiran, S Rajarammohan, H Dubey… - Microbiological …, 2020 - Elsevier
The interaction of fungal pathogens with their host requires a novel invading mechanism
and the presence of various virulence-associated components responsible for promoting the …
and the presence of various virulence-associated components responsible for promoting the …
Improved prediction of fungal effector proteins from secretomes with EffectorP 2.0
J Sperschneider, PN Dodds… - Molecular plant …, 2018 - Wiley Online Library
Plant‐pathogenic fungi secrete effector proteins to facilitate infection. We describe extensive
improvements to EffectorP, the first machine learning classifier for fungal effector prediction …
improvements to EffectorP, the first machine learning classifier for fungal effector prediction …
[HTML][HTML] Advances and challenges in computational prediction of effectors from plant pathogenic fungi
Fungi occupy diverse environmental niches and many have evolved to live a pathogenic
lifestyle, causing devastating diseases in plants and animals. The interface between host …
lifestyle, causing devastating diseases in plants and animals. The interface between host …
EffectorP 3.0: prediction of apoplastic and cytoplasmic effectors in fungi and oomycetes
J Sperschneider, PN Dodds - Molecular Plant-Microbe …, 2022 - Am Phytopath Society
Many fungi and oomycete species are devasting plant pathogens. These eukaryotic
filamentous pathogens secrete effector proteins to facilitate plant infection. Fungi and …
filamentous pathogens secrete effector proteins to facilitate plant infection. Fungi and …
[HTML][HTML] Structure analysis uncovers a highly diverse but structurally conserved effector family in phytopathogenic fungi
K de Guillen, D Ortiz-Vallejo, J Gracy, E Fournier… - PLoS …, 2015 - journals.plos.org
Phytopathogenic ascomycete fungi possess huge effector repertoires that are dominated by
hundreds of sequence-unrelated small secreted proteins. The molecular function of these …
hundreds of sequence-unrelated small secreted proteins. The molecular function of these …
Effectors of filamentous plant pathogens: commonalities amid diversity
M Franceschetti, A Maqbool… - Microbiology and …, 2017 - Am Soc Microbiol
Fungi and oomycetes are filamentous microorganisms that include a diversity of highly
developed pathogens of plants. These are sophisticated modulators of plant processes that …
developed pathogens of plants. These are sophisticated modulators of plant processes that …