In vivo dynamics of RNA polymerase II transcription
X Darzacq, Y Shav-Tal, V De Turris, Y Brody… - Nature structural & …, 2007 - nature.com
We imaged transcription in living cells using a locus-specific reporter system, which allowed
precise, single-cell kinetic measurements of promoter binding, initiation and elongation …
precise, single-cell kinetic measurements of promoter binding, initiation and elongation …
Real-time observation of transcription initiation and elongation on an endogenous yeast gene
Cellular messenger RNA levels are achieved by the combinatorial complexity of factors
controlling transcription, yet the small number of molecules involved in these pathways …
controlling transcription, yet the small number of molecules involved in these pathways …
[HTML][HTML] Modulation of RNA polymerase assembly dynamics in transcriptional regulation
SA Gorski, SK Snyder, S John, I Grummt, T Misteli - Molecular cell, 2008 - cell.com
The interaction of transcription factors with target genes is highly dynamic. Whether the
dynamic nature of these interactions is merely an intrinsic property of transcription factors or …
dynamic nature of these interactions is merely an intrinsic property of transcription factors or …
[HTML][HTML] A movie of RNA polymerase II transcription
ACM Cheung, P Cramer - Cell, 2012 - cell.com
We provide here a molecular movie that captures key aspects of RNA polymerase II initiation
and elongation. To create the movie, we combined structural snapshots of the initiation …
and elongation. To create the movie, we combined structural snapshots of the initiation …
Defining mechanisms that regulate RNA polymerase II transcription in vivo
NJ Fuda, MB Ardehali, JT Lis - Nature, 2009 - nature.com
In the eukaryotic genome, the thousands of genes that encode messenger RNA are
transcribed by a molecular machine called RNA polymerase II. Analysing the distribution …
transcribed by a molecular machine called RNA polymerase II. Analysing the distribution …
[HTML][HTML] Signaling pathways differentially affect RNA polymerase II initiation, pausing, and elongation rate in cells
Summary RNA polymerase II (Pol II) transcribes hundreds of kilobases of DNA, limiting the
production of mRNAs and lncRNAs. We used global run-on sequencing (GRO-seq) to …
production of mRNAs and lncRNAs. We used global run-on sequencing (GRO-seq) to …
Organization and regulation of gene transcription
P Cramer - Nature, 2019 - nature.com
The regulated transcription of genes determines cell identity and function. Recent structural
studies have elucidated mechanisms that govern the regulation of transcription by RNA …
studies have elucidated mechanisms that govern the regulation of transcription by RNA …
Transcription initiation by human RNA polymerase II visualized at single-molecule resolution
Forty years of classical biochemical analysis have identified the molecular players involved
in initiation of transcription by eukaryotic RNA polymerase II (Pol II) and largely assigned …
in initiation of transcription by eukaryotic RNA polymerase II (Pol II) and largely assigned …
RNA polymerase is poised for activation across the genome
GW Muse, DA Gilchrist, S Nechaev, R Shah… - Nature …, 2007 - nature.com
Regulation of gene expression is integral to the development and survival of all organisms.
Transcription begins with the assembly of a pre-initiation complex at the gene promoter …
Transcription begins with the assembly of a pre-initiation complex at the gene promoter …
Imaging RNA polymerase III transcription using a photostable RNA–fluorophore complex
Quantitative measurement of transcription rates in live cells is important for revealing
mechanisms of transcriptional regulation. This is particularly challenging when measuring …
mechanisms of transcriptional regulation. This is particularly challenging when measuring …