Docking techniques in pharmacology: How much promising?

M Gupta, R Sharma, A Kumar - Computational biology and chemistry, 2018 - Elsevier
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A good ligand is hard to find: Automated docking methods

JM Blaney, JS Dixon - Perspectives in Drug Discovery and Design, 1993 - Springer
Many approaches have been developed for solving the 'docking problem': Predict the
structure and binding free energy of a ligand-receptor complex given only the structures of …

Challenges and advances in computational docking: 2009 in review

E Yuriev, M Agostino… - Journal of Molecular …, 2011 - Wiley Online Library
Docking is a computational technique that places a small molecule (ligand) in the binding
site of its macromolecular target (receptor) and estimates its binding affinity. This review …

Relevance of molecular docking studies in drug designing

R Jakhar, M Dangi, A Khichi… - Current …, 2020 - ingentaconnect.com
Molecular Docking is used to positioning the computer-generated 3D structure of small
ligands into a receptor structure in a variety of orientations, conformations and positions …

The latest automated docking technologies for novel drug discovery

J Caballero - Expert opinion on drug discovery, 2021 - Taylor & Francis
Introduction Molecular docking has been consolidated as one of the most important methods
in the molecular modeling field. It has been recognized as a prominent tool in the study of …

Integrating molecular docking and molecular dynamics simulations

LHS Santos, RS Ferreira, ER Caffarena - Docking screens for drug …, 2019 - Springer
Computational methods, applied at the early stages of the drug design process, use current
technology to provide valuable insights into the understanding of chemical systems in a …

Latest developments in molecular docking: 2010–2011 in review

E Yuriev, PA Ramsland - Journal of Molecular Recognition, 2013 - Wiley Online Library
The aim of docking is to accurately predict the structure of a ligand within the constraints of a
receptor binding site and to correctly estimate the strength of binding. We discuss, in detail …

Improvements, trends, and new ideas in molecular docking: 2012–2013 in review

E Yuriev, J Holien, PA Ramsland - Journal of Molecular …, 2015 - Wiley Online Library
Molecular docking is a computational method for predicting the placement of ligands in the
binding sites of their receptor (s). In this review, we discuss the methodological …

Docking small-molecule ligands into active sites

G Jones, P Willett - Current opinion in biotechnology, 1995 - Elsevier
Docking involves the development of computer algorithms that evaluate the binding modes
of putative ligands in receptor sites. The principal advances of the past year have been the …

The art and science of molecular docking

JM Paggi, A Pandit, RO Dror - Annual Review of Biochemistry, 2024 - annualreviews.org
Molecular docking has become an essential part of a structural biologist's and medicinal
chemist's toolkits. Given a chemical compound and the three-dimensional structure of a …