A High-Quality Assembly of the Nine-Spined Stickleback (Pungitius pungitius) Genome
The Gasterosteidae fish family hosts several species that are important models for eco-
evolutionary, genetic, and genomic research. In particular, a wealth of genetic and genomic …
evolutionary, genetic, and genomic research. In particular, a wealth of genetic and genomic …
[HTML][HTML] Genomic divergence between nine-and three-spined sticklebacks
Background Comparative genomics approaches help to shed light on evolutionary
processes that shape differentiation between lineages. The nine-spined stickleback …
processes that shape differentiation between lineages. The nine-spined stickleback …
Improved contiguity of the threespine stickleback genome using long-read sequencing
While the cost and time for assembling a genome has drastically decreased, it still remains a
challenge to assemble a highly contiguous genome. These challenges are rapidly being …
challenge to assemble a highly contiguous genome. These challenges are rapidly being …
Genome‐wide patterns of standing genetic variation in a marine population of three‐spined sticklebacks
Since the end of the Pleistocene, the three‐spined stickleback (Gasterosteus aculeatus) has
repeatedly colonized and adapted to various freshwater habitats probably originating from …
repeatedly colonized and adapted to various freshwater habitats probably originating from …
Genome assembly improvement and mapping convergently evolved skeletal traits in sticklebacks with genotyping-by-sequencing
Marine populations of the threespine stickleback (Gasterosteus aculeatus) have repeatedly
colonized and rapidly adapted to freshwater habitats, providing a powerful system to map …
colonized and rapidly adapted to freshwater habitats, providing a powerful system to map …
Improvement of the threespine stickleback genome using a Hi-C-based proximity-guided assembly
Scaffolding genomes into complete chromosome assemblies remains challenging even with
the rapidly increasing sequence coverage generated by current next-generation sequence …
the rapidly increasing sequence coverage generated by current next-generation sequence …
[HTML][HTML] Utility of sequenced genomes for microsatellite marker development in non-model organisms: a case study of functionally important genes in nine-spined …
T Shikano, J Ramadevi, Y Shimada, J Merilä - BMC genomics, 2010 - Springer
Background Identification of genes involved in adaptation and speciation by targeting
specific genes of interest has become a plausible strategy also for non-model organisms …
specific genes of interest has become a plausible strategy also for non-model organisms …
Molecular evolutionary and population genomic analysis of the nine‐spined stickleback using a modified restriction‐site‐associated DNA tag approach
M Bruneaux, SE Johnston, G Herczeg… - Molecular …, 2013 - Wiley Online Library
In recent years, the explosion of affordable next generation sequencing technology has
provided an unprecedented opportunity to conduct genome‐wide studies of adaptive …
provided an unprecedented opportunity to conduct genome‐wide studies of adaptive …
[HTML][HTML] Chromosome-level genome assembly of golden pompano (Trachinotus ovatus) in the family Carangidae
DC Zhang, L Guo, HY Guo, KC Zhu, SQ Li, Y Zhang… - Scientific Data, 2019 - nature.com
Golden pompano (Trachinotus ovatus), a marine fish in the Carangidae family, has a wide
geographical distribution and adapts to severe environmental rigours. It is also an …
geographical distribution and adapts to severe environmental rigours. It is also an …
[HTML][HTML] The First Highly Contiguous Genome Assembly of Pikeperch (Sander lucioperca), an Emerging Aquaculture Species in Europe
JA Nguinkal, RM Brunner, M Verleih, A Rebl… - Genes, 2019 - mdpi.com
The pikeperch (Sander lucioperca) is a fresh and brackish water Percid fish natively
inhabiting the northern hemisphere. This species is emerging as a promising candidate for …
inhabiting the northern hemisphere. This species is emerging as a promising candidate for …