DNA-triplex stabilizing properties of 8-aminoguanine
A DNA-triplex stabilizing purine (8-aminoguanine) is designed based on molecular
modeling and synthesized. The substitution of guanine by 8-aminoguanine largely stabilizes …
modeling and synthesized. The substitution of guanine by 8-aminoguanine largely stabilizes …
An Unusually Stable Purine (Purine-Pyrimidine) Short Triplex.: THE THIRD STRAND STABILIZES DOUBLE-STRANDED DNA∗
F Svinarchuk, J Paoletti, C Malvy - Journal of Biological Chemistry, 1995 - ASBMB
Classical models for DNA triple helix formation assume the stabilization of these structures
through the formation of Hoogsteen hydrogen bonds. This assumes that G-rich duplex DNA …
through the formation of Hoogsteen hydrogen bonds. This assumes that G-rich duplex DNA …
Stability of G, A triple helices
A Debin, C Laboulais, M Ouali, C Malvy… - Nucleic acids …, 1999 - academic.oup.com
In this work we selected double-stranded DNA sequences capable of forming stable
triplexes at 20 or 50° C with corresponding 13mer purine oligo-nucleotides. This selection …
triplexes at 20 or 50° C with corresponding 13mer purine oligo-nucleotides. This selection …
Solution Structure of an Intramolecular DNA Triplex Containing 5-(1-Propynyl)-2'-deoxyuridine Residues in the Third Strand,
AK Phipps, M Tarköy, P Schultze, J Feigon - Biochemistry, 1998 - ACS Publications
Incorporation of the modified base 5-(1-propynl)-2 '-deoxyuridine (propynylU) in the third
strand of a triplex leads to enhanced triplex stabilization. To investigate effects of the …
strand of a triplex leads to enhanced triplex stabilization. To investigate effects of the …
Structure and stability of a model pyrimidine-purine-purine DNA triple helix with a GC. cntdot. T mismatch by simulation
S Weerasinghe, PE Smith, BM Pettitt - Biochemistry, 1995 - ACS Publications
Revised Manuscript ReceivedSeptember 29, 1995® abstract: A 1.5 ns long molecular
dynamics simulation was conducted to compare the structure and stability of a model DNA …
dynamics simulation was conducted to compare the structure and stability of a model DNA …
Structure, stability, and thermodynamics of a short intermolecular purine-purine-pyrimidine triple helix
DS Pilch, C Levenson, RH Shafer - Biochemistry, 1991 - ACS Publications
Revised Manuscript Received April 18, 1991 abstract: We have investigated the structure
and physical chemistry of the d (C3T4C3)-2 [d (G3A4G3)] triple helix by polyacrylamide gel …
and physical chemistry of the d (C3T4C3)-2 [d (G3A4G3)] triple helix by polyacrylamide gel …
Stabilization of the Purine• Purine• Pyrimidine DNA Base Triplets by Divalent Metal Cations
J Šponer, M Sabat, JV Burda, AM Doody… - Journal of …, 1998 - Taylor & Francis
Purine• purine• pyrimidine (Pu• Pu• Py) DNA triplexes are formed by binding a purine-rich
oligonucleotide to the purine strand of a DNA duplex. The third strand assumes an …
oligonucleotide to the purine strand of a DNA duplex. The third strand assumes an …
Stabilization of the Purine• Purine• Pyrimidine DNA Base Triplets by Divalent Metal Cations (commentary)
VN Potaman, VN Soyfer - Journal of Biomolecular Structure and …, 1998 - Taylor & Francis
Understanding the stability of the Purine• Purine• Pyrimidine (Pu• Pu• Py) triplex has been a
challenge for a number of years. It is generally accepted that the stabilization of this triplex …
challenge for a number of years. It is generally accepted that the stabilization of this triplex …
Hoogsteen-based parallel-stranded duplexes of DNA. Effect of 8-amino-purine derivatives
The structure of parallel-stranded duplexes of DNA-containing a mixture of guanines (G) and
adenines (A) is studied by means of molecular dynamics (MD) simulation, as well as NMR …
adenines (A) is studied by means of molecular dynamics (MD) simulation, as well as NMR …
Sequence specificity in triple helix formation: experimental and theoretical studies of the effect of mismatches on triplex stability
JL Mergny, JS Sun, M Rougee… - Biochemistry, 1991 - ACS Publications
Revised Manuscript Received July 16, 1991 abstract: The specificity of a homopyrimidine
oligonucleotide binding to a homopurine-homopyrimidine sequence on double-stranded …
oligonucleotide binding to a homopurine-homopyrimidine sequence on double-stranded …