EffectorP 3.0: prediction of apoplastic and cytoplasmic effectors in fungi and oomycetes
J Sperschneider, PN Dodds - Molecular plant-microbe …, 2022 - Am Phytopath Society
Many fungi and oomycete species are devasting plant pathogens. These eukaryotic
filamentous pathogens secrete effector proteins to facilitate plant infection. Fungi and …
filamentous pathogens secrete effector proteins to facilitate plant infection. Fungi and …
EffectorP: predicting fungal effector proteins from secretomes using machine learning
Eukaryotic filamentous plant pathogens secrete effector proteins that modulate the host cell
to facilitate infection. Computational effector candidate identification and subsequent …
to facilitate infection. Computational effector candidate identification and subsequent …
Evaluation of secretion prediction highlights differing approaches needed for oomycete and fungal effectors
The steadily increasing number of sequenced fungal and oomycete genomes has enabled
detailed studies of how these eukaryotic microbes infect plants and cause devastating …
detailed studies of how these eukaryotic microbes infect plants and cause devastating …
Improved prediction of fungal effector proteins from secretomes with EffectorP 2.0
J Sperschneider, PN Dodds… - Molecular plant …, 2018 - Wiley Online Library
Plant‐pathogenic fungi secrete effector proteins to facilitate infection. We describe extensive
improvements to EffectorP, the first machine learning classifier for fungal effector prediction …
improvements to EffectorP, the first machine learning classifier for fungal effector prediction …
[HTML][HTML] Effector biology of biotrophic plant fungal pathogens: Current advances and future prospects
The interaction of fungal pathogens with their host requires a novel invading mechanism
and the presence of various virulence-associated components responsible for promoting the …
and the presence of various virulence-associated components responsible for promoting the …
Advances and challenges in computational prediction of effectors from plant pathogenic fungi
Fungi occupy diverse environmental niches and many have evolved to live a pathogenic
lifestyle, causing devastating diseases in plants and animals. The interface between host …
lifestyle, causing devastating diseases in plants and animals. The interface between host …
Computational prediction of effector proteins in fungi: opportunities and challenges
Effector proteins are mostly secretory proteins that stimulate plant infection by manipulating
the host response. Identifying fungal effector proteins and understanding their function is of …
the host response. Identifying fungal effector proteins and understanding their function is of …
ApoplastP: prediction of effectors and plant proteins in the apoplast using machine learning
J Sperschneider, PN Dodds, KB Singh… - New …, 2018 - Wiley Online Library
The plant apoplast is integral to intercellular signalling, transport and plant–pathogen
interactions. Plant pathogens deliver effectors both into the apoplast and inside host cells …
interactions. Plant pathogens deliver effectors both into the apoplast and inside host cells …
A catalogue of the effector secretome of plant pathogenic oomycetes
S Kamoun - Annu. Rev. Phytopathol., 2006 - annualreviews.org
The oomycetes form a phylogenetically distinct group of eukaryotic microorganisms that
includes some of the most notorious pathogens of plants. Oomycetes accomplish parasitic …
includes some of the most notorious pathogens of plants. Oomycetes accomplish parasitic …
LOCALIZER: subcellular localization prediction of both plant and effector proteins in the plant cell
Pathogens secrete effector proteins and many operate inside plant cells to enable infection.
Some effectors have been found to enter subcellular compartments by mimicking host …
Some effectors have been found to enter subcellular compartments by mimicking host …