Understanding mutational effects in digenic diseases

A Gazzo, D Raimondi, D Daneels… - Nucleic acids …, 2017 - academic.oup.com
To further our understanding of the complexity and genetic heterogeneity of rare diseases, it
has become essential to shed light on how combinations of variants in different genes are …

DIDA: A curated and annotated digenic diseases database

AM Gazzo, D Daneels, E Cilia, M Bonduelle… - Nucleic acids …, 2016 - academic.oup.com
DIDA (DIgenic diseases DAtabase) is a novel database that provides for the first time
detailed information on genes and associated genetic variants involved in digenic diseases …

Assessing the digenic model in rare disorders using population sequencing data

N Moreno-Ruiz, O Lao, JI Aróstegui… - European Journal of …, 2022 - nature.com
An important fraction of patients with rare disorders remains with no clear genetic diagnostic,
even after whole-exome or whole-genome sequencing, posing a difficulty in giving …

Predicting disease-causing variant combinations

S Papadimitriou, A Gazzo… - Proceedings of the …, 2019 - National Acad Sciences
Notwithstanding important advances in the context of single-variant pathogenicity
identification, novel breakthroughs in discerning the origins of many rare diseases require …

Identifying digenic disease genes via machine learning in the Undiagnosed Diseases Network

S Mukherjee, JD Cogan, JH Newman… - The American Journal of …, 2021 - cell.com
Rare diseases affect millions of people worldwide, and discovering their genetic causes is
challenging. More than half of the individuals analyzed by the Undiagnosed Diseases …

Digenic inheritance in medical genetics

AA Schäffer - Journal of medical genetics, 2013 - jmg.bmj.com
Digenic inheritance (DI) is the simplest form of inheritance for genetically complex diseases.
By contrast with the thousands of reports that mutations in single genes cause human …

Digenic inheritance and genetic modifiers

C Deltas - Clinical genetics, 2018 - Wiley Online Library
Digenic inheritance (DI) concerns pathologies with the simplest form of multigenic etiology,
implicating more than 1 gene (and perhaps the environment). True DI is when biallelic or …

How important are rare variants in common disease?

A Saint Pierre, E Génin - Briefings in functional genomics, 2014 - academic.oup.com
Genome-wide association studies have uncovered hundreds of common genetic variants
involved in complex diseases. However, for most complex diseases, these common genetic …

Calculating the statistical significance of rare variants causal for Mendelian and complex disorders

AR Rao, SF Nelson - BMC medical genomics, 2018 - Springer
Background With the expanding use of next-gen sequencing (NGS) to diagnose the
thousands of rare Mendelian genetic diseases, it is critical to be able to interpret individual …

Interpreting de novo Variation in Human Disease Using denovolyzeR

JS Ware, KE Samocha, J Homsy… - Current protocols in …, 2015 - Wiley Online Library
Spontaneously arising (de novo) genetic variants are important in human disease, yet every
individual carries many such variants, with a median of 1 de novo variant affecting the …